Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BSHJ0_RS04485 Genome accession   NZ_CP016894
Coordinates   878496..879290 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain HJ0-6     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 873496..884290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSHJ0_RS04455 (BSHJ0_00870) sxzA 874335..875366 (+) 1032 WP_003233568.1 FecCD family ABC transporter permease -
  BSHJ0_RS04460 (BSHJ0_00871) yfhB 875481..876362 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  BSHJ0_RS04465 (BSHJ0_00872) yfhC 876450..877034 (+) 585 WP_003243940.1 nitroreductase family protein -
  BSHJ0_RS04470 (BSHJ0_00873) yfhD 877073..877264 (-) 192 WP_003233561.1 YfhD family protein -
  BSHJ0_RS04475 (BSHJ0_00874) yfhE 877331..877441 (-) 111 WP_003223230.1 YfhE family protein -
  BSHJ0_RS04480 (BSHJ0_00875) yfhF 877496..878407 (-) 912 WP_038427537.1 TIGR01777 family oxidoreductase -
  BSHJ0_RS04485 (BSHJ0_00876) recX 878496..879290 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  BSHJ0_RS04490 (BSHJ0_00877) yfhH 879292..879612 (+) 321 WP_029726843.1 YfhH family protein -
  BSHJ0_RS04500 (BSHJ0_00879) yfhI 879749..880942 (+) 1194 WP_072692836.1 MFS transporter -
  BSHJ0_RS04505 (BSHJ0_00880) sspK 880974..881126 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  BSHJ0_RS04510 (BSHJ0_00881) yfhJ 881251..881520 (+) 270 WP_003243789.1 YfhJ family protein -
  BSHJ0_RS04515 (BSHJ0_00882) yfhK 881665..882183 (+) 519 WP_029726841.1 SH3 domain-containing protein -
  BSHJ0_RS04520 (BSHJ0_00883) spdL 882268..882585 (+) 318 WP_032679045.1 SdpC immunity protein SpdL -
  BSHJ0_RS04525 (BSHJ0_00884) ephM 882587..883447 (+) 861 WP_029726839.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=193421 BSHJ0_RS04485 WP_029726844.1 878496..879290(+) (recX) [Bacillus subtilis strain HJ0-6]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=193421 BSHJ0_RS04485 WP_029726844.1 878496..879290(+) (recX) [Bacillus subtilis strain HJ0-6]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment