Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   S100757_RS09990 Genome accession   NZ_CP021499
Coordinates   1885076..1885693 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis subsp. subtilis strain SRCM100757     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1880076..1890693
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S100757_RS09960 (S100757_01970) yndJ 1880395..1882035 (+) 1641 WP_014479931.1 YndJ family protein -
  S100757_RS09965 - 1882125..1882439 (+) 315 Protein_1913 hypothetical protein -
  S100757_RS09970 (S100757_01973) pghL 1882664..1883422 (+) 759 WP_087614564.1 gamma-polyglutamate hydrolase PghL -
  S100757_RS09975 (S100757_01974) - 1883449..1883898 (-) 450 WP_014479935.1 YndM family protein -
  S100757_RS09980 (S100757_01975) fosM 1884107..1884526 (+) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  S100757_RS21705 - 1884450..1884789 (+) 340 Protein_1917 hypothetical protein -
  S100757_RS09990 (S100757_01976) dinR/lexA 1885076..1885693 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  S100757_RS09995 (S100757_01977) yneA 1885843..1886160 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  S100757_RS10000 (S100757_01978) dinL 1886179..1886832 (+) 654 WP_014479938.1 recombinase family protein -
  S100757_RS10005 (S100757_01979) ynzC 1886896..1887129 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  S100757_RS10010 (S100757_01980) recP/tkt 1887298..1889301 (+) 2004 WP_014476936.1 transketolase Machinery gene
  S100757_RS10015 (S100757_01981) sirA 1889454..1889900 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  S100757_RS10020 (S100757_01982) yneF 1889986..1890204 (+) 219 WP_003221221.1 YneF family protein -
  S100757_RS10025 (S100757_01983) ynzD 1890278..1890451 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=193367 S100757_RS09990 WP_003238209.1 1885076..1885693(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain SRCM100757]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=193367 S100757_RS09990 WP_003238209.1 1885076..1885693(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain SRCM100757]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCAATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1