Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   S100757_RS08115 Genome accession   NZ_CP021499
Coordinates   1529097..1529672 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   O34857
Organism   Bacillus subtilis subsp. subtilis strain SRCM100757     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1524097..1534672
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S100757_RS08085 (S100757_01597) dapD 1524285..1524995 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  S100757_RS08090 (S100757_01598) dapI 1525065..1526189 (+) 1125 WP_043857415.1 N-acetyldiaminopimelate deacetylase -
  S100757_RS08095 (S100757_01599) ykuS 1526251..1526496 (+) 246 WP_003232382.1 YkuS family protein -
  S100757_RS08100 (S100757_01600) mscT 1526533..1527336 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  S100757_RS08105 (S100757_01601) ahpA 1527573..1528115 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  S100757_RS08110 (S100757_01602) ykuV 1528185..1528631 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  S100757_RS08115 (S100757_01603) rok 1529097..1529672 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  S100757_RS08120 (S100757_01604) cse15 1529713..1530678 (-) 966 WP_021479381.1 spore protein Cse15 -
  S100757_RS08125 (S100757_01605) mobA 1530815..1531414 (+) 600 WP_087614541.1 molybdenum cofactor guanylyltransferase -
  S100757_RS08130 (S100757_01606) moeB 1531465..1532484 (+) 1020 WP_014479671.1 molybdopterin-synthase adenylyltransferase MoeB -
  S100757_RS08135 (S100757_01607) glp 1532502..1533794 (+) 1293 WP_014479672.1 gephyrin-like molybdotransferase Glp -
  S100757_RS08140 (S100757_01608) mobB 1533755..1534276 (+) 522 WP_014479673.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=193350 S100757_RS08115 WP_003232378.1 1529097..1529672(+) (rok) [Bacillus subtilis subsp. subtilis strain SRCM100757]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=193350 S100757_RS08115 WP_003232378.1 1529097..1529672(+) (rok) [Bacillus subtilis subsp. subtilis strain SRCM100757]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5ZUX
  PDB 5ZUZ

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment