Detailed information NTG0193329

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: BEN15_RS08815
• Genome accession: NZ_CP016877
• Coordinates: 1669493..1670374 (-)
• Length: 293 a.a.
• NCBI ID: WP_065973257.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain KLDS 3.1003
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1664493..1675374

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BEN15_RS08790 (BEN15_08785)	vicR	1665197..1665904 (-)	708	WP_011226084.1	response regulator YycF	Regulator
BEN15_RS08795 (BEN15_08790)	-	1666431..1667198 (+)	768	WP_065973255.1	amino acid ABC transporter ATP-binding protein	-
BEN15_RS08800 (BEN15_08795)	-	1667210..1668043 (+)	834	WP_002953142.1	transporter substrate-binding domain-containing protein	-
BEN15_RS08805 (BEN15_08800)	-	1668061..1668759 (+)	699	WP_065973256.1	amino acid ABC transporter permease	-
BEN15_RS08810 (BEN15_08805)	-	1668771..1669421 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
BEN15_RS08815 (BEN15_08810)	endA	1669493..1670374 (-)	882	WP_065973257.1	DNA/RNA non-specific endonuclease	Machinery gene
BEN15_RS08820 (BEN15_08815)	-	1670436..1670624 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
BEN15_RS08825 (BEN15_08820)	murA	1670626..1671897 (-)	1272	WP_022096753.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
BEN15_RS08830 (BEN15_08825)	-	1671967..1672203 (-)	237	WP_002946959.1	DUF1146 family protein	-
BEN15_RS08835 (BEN15_08830)	galE	1672392..1673405 (-)	1014	WP_002946961.1	UDP-glucose 4-epimerase GalE	-
BEN15_RS08840 (BEN15_08835)	-	1673420..1673854 (-)	435	WP_231107152.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31915.66 Da
• Isoelectric Point: 10.1214

>NTDB_id=193329 BEN15_RS08815 WP_065973257.1 1669493..1670374(-) (endA) [Streptococcus thermophilus strain KLDS 3.1003]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLETSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
VGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENVAVQTAWANQAYSDSSTGQNYYESLVRKALDRNKRVR
YRVTLIYEGENLIPSGTHLEAKSVDGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=193329 BEN15_RS08815 WP_065973257.1 1669493..1670374(-) (endA) [Streptococcus thermophilus strain KLDS 3.1003]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGAAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CCAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GTTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATGTTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAGAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGTAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.385	81.57	0.59
endA	Streptococcus pneumoniae D39	72.385	81.57	0.59
endA	Streptococcus pneumoniae R6	72.385	81.57	0.59
endA	Streptococcus pneumoniae TIGR4	72.385	81.57	0.59