Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   S101444_RS21055 Genome accession   NZ_CP021498
Coordinates   3978146..3978994 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis subsp. subtilis strain SRCM101444     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3973146..3983994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101444_RS21035 (S101444_04185) yyaE 3973679..3975682 (-) 2004 WP_087614843.1 molybdopterin-dependent oxidoreductase -
  S101444_RS21040 (S101444_04186) yyzM 3975733..3975939 (-) 207 WP_003226838.1 DUF951 family protein -
  S101444_RS21045 (S101444_04187) - 3976033..3977049 (-) 1017 WP_010886647.1 membrane protein -
  S101444_RS21050 (S101444_04188) yyaC 3977490..3978107 (+) 618 WP_015715079.1 spore protease YyaC -
  S101444_RS21055 (S101444_04189) spo0J 3978146..3978994 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  S101444_RS21060 (S101444_04190) soj 3978987..3979748 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  S101444_RS21065 (S101444_04191) yyaB 3979995..3980434 (+) 440 Protein_4109 PH domain-containing protein -
  S101444_RS21070 (S101444_04192) noc 3980485..3981336 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  S101444_RS21075 (S101444_04193) rsmG 3981458..3982177 (-) 720 WP_014481512.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=193290 S101444_RS21055 WP_003226832.1 3978146..3978994(-) (spo0J) [Bacillus subtilis subsp. subtilis strain SRCM101444]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=193290 S101444_RS21055 WP_003226832.1 3978146..3978994(-) (spo0J) [Bacillus subtilis subsp. subtilis strain SRCM101444]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCTATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTCTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTCGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTCCTTGGCTTGAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTTAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AATTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCGTAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387

Multiple sequence alignment