Detailed information NTG0193253

Bioinformatically predicted

Overview

• Name: rocC
• Type: Regulator
• Locus tag: BE846_RS07005
• Genome accession: NZ_CP016876
• Coordinates: 1594578..1595270 (+)
• Length: 230 a.a.
• NCBI ID: WP_070322217.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila strain FFI337
• Function: rocR chaperone; repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1589578..1600270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BE846_RS15565	-	1590195..1590371 (-)	177	WP_011214409.1	dodecin domain-containing protein	-
BE846_RS06990 (BE846_06990)	-	1590549..1593017 (+)	2469	WP_011214410.1	hypothetical protein	-
BE846_RS06995 (BE846_06995)	dapB	1593120..1593851 (-)	732	WP_011214411.1	4-hydroxy-tetrahydrodipicolinate reductase	-
BE846_RS07000 (BE846_07000)	-	1594036..1594221 (-)	186	WP_070322218.1	hypothetical protein	-
BE846_RS07005 (BE846_07005)	rocC	1594578..1595270 (+)	693	WP_070322217.1	ProQ/FINO family protein	Regulator
BE846_RS07010 (BE846_07010)	-	1595271..1596341 (+)	1071	WP_011214414.1	hypothetical protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 25751.64 Da
• Isoelectric Point: 10.7292

>NTDB_id=193253 BE846_RS07005 WP_070322217.1 1594578..1595270(+) (rocC) [Legionella pneumophila subsp. pneumophila strain FFI337]
MRKQALHPRTAVINKAQKNQSRRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGVSKSKLREAVVL
FTRRLDYLACLKTREVRIDLLGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSHVNSQSSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETAE

Nucleotide

• Length: 693 bp

>NTDB_id=193253 BE846_RS07005 WP_070322217.1 1594578..1595270(+) (rocC) [Legionella pneumophila subsp. pneumophila strain FFI337]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAGGCGAGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGCCCATTAAAGATTGGTATTA
TGTCCGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAGTTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAACTCGTGAAGTCCGTATCGATTTGCTCGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAGTCAGTCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCCGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGAGAAAAAGGAAACAGCAGAGTAA

Domains

Predicted by InterproScan.

• ProQ/FINO family (ProQ) (26-132)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rocC	Legionella pneumophila str. Paris	96.087	100	0.961