Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | BE845_RS13405 | Genome accession | NZ_CP016874 |
| Coordinates | 3024680..3024994 (+) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila subsp. pneumophila strain FFI329 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3019680..3029994
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE845_RS13380 (BE845_13380) | yajC | 3019700..3020035 (+) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
| BE845_RS13385 (BE845_13385) | secD | 3020057..3021913 (+) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| BE845_RS13390 (BE845_13390) | secF | 3021926..3022843 (+) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| BE845_RS13395 (BE845_13395) | - | 3023033..3023374 (-) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| BE845_RS13400 (BE845_13400) | hisC | 3023411..3024520 (-) | 1110 | WP_011215962.1 | histidinol-phosphate transaminase | - |
| BE845_RS13405 (BE845_13405) | lpp1978 | 3024680..3024994 (+) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BE845_RS13410 (BE845_13410) | lpp1977 | 3024933..3025739 (+) | 807 | WP_011215960.1 | PilW family protein | Machinery gene |
| BE845_RS13415 (BE845_13415) | lpp1976 | 3025736..3026293 (+) | 558 | WP_011215959.1 | hypothetical protein | Machinery gene |
| BE845_RS13420 (BE845_13420) | - | 3026403..3027593 (+) | 1191 | WP_011215958.1 | murein transglycosylase A | - |
| BE845_RS13425 (BE845_13425) | - | 3027717..3028577 (-) | 861 | WP_011215957.1 | polysaccharide deacetylase family protein | - |
| BE845_RS13430 (BE845_13430) | - | 3029068..3029568 (+) | 501 | WP_011214243.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=193221 BE845_RS13405 WP_011215961.1 3024680..3024994(+) (lpp1978) [Legionella pneumophila subsp. pneumophila strain FFI329]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=193221 BE845_RS13405 WP_011215961.1 3024680..3024994(+) (lpp1978) [Legionella pneumophila subsp. pneumophila strain FFI329]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |