Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   S101444_RS09995 Genome accession   NZ_CP021498
Coordinates   1885060..1885677 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis subsp. subtilis strain SRCM101444     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1880060..1890677
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101444_RS09965 (S101444_01979) yndJ 1880379..1882019 (+) 1641 WP_014479931.1 YndJ family protein -
  S101444_RS09970 - 1882109..1882423 (+) 315 Protein_1914 hypothetical protein -
  S101444_RS09975 (S101444_01982) pghL 1882648..1883406 (+) 759 WP_087614564.1 gamma-polyglutamate hydrolase PghL -
  S101444_RS09980 (S101444_01983) - 1883433..1883882 (-) 450 WP_014479935.1 YndM family protein -
  S101444_RS09985 (S101444_01984) fosM 1884091..1884510 (+) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  S101444_RS21680 - 1884434..1884773 (+) 340 Protein_1918 hypothetical protein -
  S101444_RS09995 (S101444_01985) dinR/lexA 1885060..1885677 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  S101444_RS10000 (S101444_01986) yneA 1885827..1886144 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  S101444_RS10005 (S101444_01987) dinL 1886163..1886816 (+) 654 WP_014479938.1 recombinase family protein -
  S101444_RS10010 (S101444_01988) ynzC 1886880..1887113 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  S101444_RS10015 (S101444_01989) recP/tkt 1887282..1889285 (+) 2004 WP_014476936.1 transketolase Machinery gene
  S101444_RS10020 (S101444_01990) sirA 1889438..1889884 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  S101444_RS10025 (S101444_01991) yneF 1889970..1890188 (+) 219 WP_003221221.1 YneF family protein -
  S101444_RS10030 (S101444_01992) ynzD 1890262..1890435 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=193218 S101444_RS09995 WP_003238209.1 1885060..1885677(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain SRCM101444]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=193218 S101444_RS09995 WP_003238209.1 1885060..1885677(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain SRCM101444]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCAATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment