Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilP   Type   Machinery gene
Locus tag   BE845_RS03610 Genome accession   NZ_CP016874
Coordinates   802035..802619 (-) Length   194 a.a.
NCBI ID   WP_011215097.1    Uniprot ID   Q5WXX8
Organism   Legionella pneumophila subsp. pneumophila strain FFI329     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 797035..807619
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BE845_RS03595 (BE845_03595) aroB 797866..798975 (-) 1110 WP_011215099.1 3-dehydroquinate synthase -
  BE845_RS03600 (BE845_03600) aroK 798962..799489 (-) 528 WP_010946667.1 shikimate kinase AroK -
  BE845_RS03605 (BE845_03605) pilQ 799935..802031 (-) 2097 WP_070322471.1 type IV pilus secretin PilQ Machinery gene
  BE845_RS03610 (BE845_03610) pilP 802035..802619 (-) 585 WP_011215097.1 pilus assembly protein PilP Machinery gene
  BE845_RS03615 (BE845_03615) pilO 802616..803215 (-) 600 WP_011215096.1 type 4a pilus biogenesis protein PilO Machinery gene
  BE845_RS03620 (BE845_03620) pilN 803229..803777 (-) 549 WP_011215095.1 PilN domain-containing protein Machinery gene
  BE845_RS03625 (BE845_03625) pilM 803781..804845 (-) 1065 WP_011215094.1 type IV pilus assembly protein PilM Machinery gene
  BE845_RS03630 (BE845_03630) ravI 805262..806269 (+) 1008 WP_011215093.1 Dot/Icm T4SS effector RavI -

Sequence


Protein


Download         Length: 194 a.a.        Molecular weight: 22070.68 Da        Isoelectric Point: 10.4471

>NTDB_id=193198 BE845_RS03610 WP_011215097.1 802035..802619(-) (pilP) [Legionella pneumophila subsp. pneumophila strain FFI329]
MIIKNNQTLILGFFGNSLRVSLTAATFRKSLLMGLLVLLLSACSGDSSDLVKYINEVKSRPGRPIEPIPKFAPLPIFRFP
ENDNRRNPFKPIDQKKRNDIYAPDKKRPKQPLESFPLDALKFVGTLKKDNEIWALIKQPDGQISRVRVGDYMGQNYGRII
LIKNDLIKLEETVQKSGTWEKQSTTINLDTGKQE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=193198 BE845_RS03610 WP_011215097.1 802035..802619(-) (pilP) [Legionella pneumophila subsp. pneumophila strain FFI329]
ATGATAATTAAAAATAACCAGACGCTTATATTAGGCTTTTTCGGAAATTCTCTGCGTGTTTCACTCACAGCAGCGACTTT
CCGAAAAAGCCTATTGATGGGGTTATTGGTACTATTACTTAGTGCCTGCTCTGGTGATAGCAGTGACCTTGTTAAGTACA
TCAACGAAGTGAAATCAAGACCAGGAAGACCTATCGAGCCTATTCCCAAATTCGCTCCTTTGCCAATTTTTAGATTTCCA
GAAAACGACAATAGGCGAAATCCATTCAAGCCTATTGATCAAAAAAAGAGAAATGATATTTATGCCCCAGATAAAAAAAG
GCCTAAGCAGCCTTTGGAATCTTTTCCTCTGGATGCTTTAAAATTTGTAGGTACTTTAAAAAAAGACAATGAAATCTGGG
CTCTGATTAAACAACCTGACGGTCAGATTAGCCGTGTTAGGGTTGGAGATTACATGGGACAAAATTATGGACGTATTATT
TTGATTAAAAATGATCTCATTAAATTGGAAGAAACTGTACAGAAATCAGGAACGTGGGAAAAACAGTCCACCACAATTAA
TTTGGATACTGGCAAGCAGGAGTGA

Domains


Predicted by InterproScan.

(49-188)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5WXX8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Legionella pneumophila strain ERS1305867

94.33

100

0.943


Multiple sequence alignment