Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   BE845_RS01660 Genome accession   NZ_CP016874
Coordinates   369400..369741 (-) Length   113 a.a.
NCBI ID   WP_025519545.1    Uniprot ID   A0A128V7G5
Organism   Legionella pneumophila subsp. pneumophila strain FFI329     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 364400..374741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BE845_RS01640 (BE845_01640) - 364641..365921 (+) 1281 WP_011215421.1 MFS transporter -
  BE845_RS01645 (BE845_01645) - 365996..367288 (-) 1293 WP_011215420.1 MFS transporter -
  BE845_RS01650 (BE845_01650) - 367344..368444 (-) 1101 WP_011215419.1 anhydro-N-acetylmuramic acid kinase -
  BE845_RS01655 (BE845_01655) - 368556..369344 (-) 789 WP_011215418.1 TatD family hydrolase -
  BE845_RS01660 (BE845_01660) pilZ 369400..369741 (-) 342 WP_025519545.1 PilZ domain-containing protein Machinery gene
  BE845_RS01665 (BE845_01665) - 369867..370772 (-) 906 WP_011215416.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  BE845_RS01670 (BE845_01670) tmk 370769..371407 (-) 639 WP_011215415.1 dTMP kinase -
  BE845_RS01675 (BE845_01675) mltG 371407..372405 (-) 999 WP_011215414.1 endolytic transglycosylase MltG -
  BE845_RS01680 (BE845_01680) fabF 372406..373644 (-) 1239 WP_011215413.1 beta-ketoacyl-ACP synthase II -
  BE845_RS01685 (BE845_01685) acpP 373663..373911 (-) 249 WP_003631752.1 acyl carrier protein -
  BE845_RS01690 (BE845_01690) fabG 373996..374739 (-) 744 WP_413463057.1 3-oxoacyl-ACP reductase FabG -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=193194 BE845_RS01660 WP_025519545.1 369400..369741(-) (pilZ) [Legionella pneumophila subsp. pneumophila strain FFI329]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=193194 BE845_RS01660 WP_025519545.1 369400..369741(-) (pilZ) [Legionella pneumophila subsp. pneumophila strain FFI329]
ATGACCGAAAAACCACAGCTTATAAATTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGCAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains


Predicted by InterproScan.

(8-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A128V7G5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

100

100

1

  pilZ Legionella pneumophila strain ERS1305867

100

100

1


Multiple sequence alignment