Detailed information NTG0193176

Bioinformatically predicted

Overview

• Name: rocC
• Type: Regulator
• Locus tag: BE844_RS09235
• Genome accession: NZ_CP016873
• Coordinates: 2097527..2098219 (+)
• Length: 230 a.a.
• NCBI ID: WP_070322217.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila strain FFI105
• Function: rocR chaperone; repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2092527..2103219

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BE844_RS15585	-	2093144..2093320 (-)	177	WP_011214409.1	dodecin domain-containing protein	-
BE844_RS09220 (BE844_09220)	-	2093498..2095966 (+)	2469	WP_011214410.1	hypothetical protein	-
BE844_RS09225 (BE844_09225)	dapB	2096069..2096800 (-)	732	WP_011214411.1	4-hydroxy-tetrahydrodipicolinate reductase	-
BE844_RS09230 (BE844_09230)	-	2096985..2097170 (-)	186	WP_070322218.1	hypothetical protein	-
BE844_RS09235 (BE844_09235)	rocC	2097527..2098219 (+)	693	WP_070322217.1	ProQ/FINO family protein	Regulator
BE844_RS09240 (BE844_09240)	-	2098220..2099290 (+)	1071	WP_011214414.1	hypothetical protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 25751.64 Da
• Isoelectric Point: 10.7292

>NTDB_id=193176 BE844_RS09235 WP_070322217.1 2097527..2098219(+) (rocC) [Legionella pneumophila subsp. pneumophila strain FFI105]
MRKQALHPRTAVINKAQKNQSRRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGVSKSKLREAVVL
FTRRLDYLACLKTREVRIDLLGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSHVNSQSSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETAE

Nucleotide

• Length: 693 bp

>NTDB_id=193176 BE844_RS09235 WP_070322217.1 2097527..2098219(+) (rocC) [Legionella pneumophila subsp. pneumophila strain FFI105]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAGGCGAGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGCCCATTAAAGATTGGTATTA
TGTCCGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAGTTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAACTCGTGAAGTCCGTATCGATTTGCTCGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAGTCAGTCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCCGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGAGAAAAAGGAAACAGCAGAGTAA

Domains

Predicted by InterproScan.

• ProQ/FINO family (ProQ) (26-132)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rocC	Legionella pneumophila str. Paris	96.087	100	0.961