Detailed information NTG0193153

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: S101444_RS01670
• Genome accession: NZ_CP021498
• Coordinates: 300023..301144 (+)
• Length: 373 a.a.
• NCBI ID: WP_003234740.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SRCM101444
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 295023..306144

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101444_RS01645 (S101444_00320)	ycdA	295031..296095 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
S101444_RS21120	-	296118..296249 (-)	132	WP_003246334.1	hypothetical protein	-
S101444_RS01650 (S101444_00321)	ycdB	296423..297841 (+)	1419	WP_087614255.1	YcdB/YcdC domain-containing protein	-
S101444_RS01660 (S101444_00322)	ycdC	298028..299389 (+)	1362	WP_046160119.1	YcdB/YcdC domain-containing protein	-
S101444_RS01665 (S101444_00323)	cwlK	299397..299900 (-)	504	WP_046160022.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
S101444_RS01670 (S101444_00324)	rapF	300023..301144 (+)	1122	WP_003234740.1	response regulator aspartate phosphatase RapJ	Regulator
S101444_RS01675 (S101444_00325)	ycdF	301253..302029 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
S101444_RS01680 (S101444_00326)	ycdG	302054..303739 (+)	1686	WP_046160023.1	alpha-glucosidase	-
S101444_RS01685 (S101444_00327)	znuA	303927..304886 (+)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
S101444_RS01690 (S101444_00328)	znuC	304941..305636 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44427.31 Da
• Isoelectric Point: 4.8344

>NTDB_id=193153 S101444_RS01670 WP_003234740.1 300023..301144(+) (rapF) [Bacillus subtilis subsp. subtilis strain SRCM101444]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGNGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=193153 S101444_RS01670 WP_003234740.1 300023..301144(+) (rapF) [Bacillus subtilis subsp. subtilis strain SRCM101444]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCATTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAAGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAACGGTGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCAGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405