Detailed information NTG0193136

Bioinformatically predicted

Overview

• Name: rocC
• Type: Regulator
• Locus tag: BE843_RS09530
• Genome accession: NZ_CP016872
• Coordinates: 2087809..2088501 (-)
• Length: 230 a.a.
• NCBI ID: WP_070322217.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila strain FFI104
• Function: rocR chaperone; repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2082809..2093501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BE843_RS09525 (BE843_09525)	-	2086738..2087808 (-)	1071	WP_011214414.1	hypothetical protein	-
BE843_RS09530 (BE843_09530)	rocC	2087809..2088501 (-)	693	WP_070322217.1	ProQ/FINO family protein	Regulator
BE843_RS09535 (BE843_09535)	-	2088858..2089043 (+)	186	WP_070322218.1	hypothetical protein	-
BE843_RS09540 (BE843_09540)	dapB	2089228..2089959 (+)	732	WP_011214411.1	4-hydroxy-tetrahydrodipicolinate reductase	-
BE843_RS09545 (BE843_09545)	-	2090062..2092530 (-)	2469	WP_011214410.1	hypothetical protein	-
BE843_RS15565	-	2092708..2092884 (+)	177	WP_011214409.1	dodecin domain-containing protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 25751.64 Da
• Isoelectric Point: 10.7292

>NTDB_id=193136 BE843_RS09530 WP_070322217.1 2087809..2088501(-) (rocC) [Legionella pneumophila subsp. pneumophila strain FFI104]
MRKQALHPRTAVINKAQKNQSRRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGVSKSKLREAVVL
FTRRLDYLACLKTREVRIDLLGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSHVNSQSSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETAE

Nucleotide

• Length: 693 bp

>NTDB_id=193136 BE843_RS09530 WP_070322217.1 2087809..2088501(-) (rocC) [Legionella pneumophila subsp. pneumophila strain FFI104]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAGGCGAGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGCCCATTAAAGATTGGTATTA
TGTCCGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAGTTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAACTCGTGAAGTCCGTATCGATTTGCTCGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAGTCAGTCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCCGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGAGAAAAAGGAAACAGCAGAGTAA

Domains

Predicted by InterproScan.

• ProQ/FINO family (ProQ) (26-132)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rocC	Legionella pneumophila str. Paris	96.087	100	0.961