Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   BE843_RS03300 Genome accession   NZ_CP016872
Coordinates   737253..737594 (-) Length   113 a.a.
NCBI ID   WP_025519545.1    Uniprot ID   A0A128V7G5
Organism   Legionella pneumophila subsp. pneumophila strain FFI104     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 732253..742594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BE843_RS03280 (BE843_03280) - 732494..733774 (+) 1281 WP_070322036.1 MFS transporter -
  BE843_RS03285 (BE843_03285) - 733849..735141 (-) 1293 WP_070322037.1 MFS transporter -
  BE843_RS03290 (BE843_03290) - 735197..736297 (-) 1101 WP_011215419.1 anhydro-N-acetylmuramic acid kinase -
  BE843_RS03295 (BE843_03295) - 736409..737197 (-) 789 WP_011215418.1 TatD family hydrolase -
  BE843_RS03300 (BE843_03300) pilZ 737253..737594 (-) 342 WP_025519545.1 PilZ domain-containing protein Machinery gene
  BE843_RS03305 (BE843_03305) - 737720..738625 (-) 906 WP_011215416.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  BE843_RS03310 (BE843_03310) tmk 738622..739260 (-) 639 WP_011215415.1 dTMP kinase -
  BE843_RS03315 (BE843_03315) mltG 739260..740258 (-) 999 WP_011215414.1 endolytic transglycosylase MltG -
  BE843_RS03320 (BE843_03320) fabF 740259..741497 (-) 1239 WP_011215413.1 beta-ketoacyl-ACP synthase II -
  BE843_RS03325 (BE843_03325) acpP 741516..741764 (-) 249 WP_003631752.1 acyl carrier protein -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=193123 BE843_RS03300 WP_025519545.1 737253..737594(-) (pilZ) [Legionella pneumophila subsp. pneumophila strain FFI104]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=193123 BE843_RS03300 WP_025519545.1 737253..737594(-) (pilZ) [Legionella pneumophila subsp. pneumophila strain FFI104]
ATGACCGAAAAACCACAGCTTATAAATTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGCAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(8-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A128V7G5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

100

100

1
  pilZ Legionella pneumophila strain ERS1305867

100

100

1

Multiple sequence alignment