Detailed information NTG0193106

Bioinformatically predicted

Overview

• Name: fimT
• Type: Machinery gene
• Locus tag: BE842_RS14125
• Genome accession: NZ_CP016870
• Coordinates: 3159070..3159777 (-)
• Length: 235 a.a.
• NCBI ID: WP_080020479.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila strain FFI103
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3154070..3164777

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BE842_RS14110 (BE842_14110)	-	3156945..3157457 (-)	513	WP_011214849.1	pilus assembly protein	-
BE842_RS14115 (BE842_14115)	-	3157454..3158521 (-)	1068	WP_011214850.1	PilW family protein	-
BE842_RS14120 (BE842_14120)	pilV	3158518..3159057 (-)	540	WP_011214851.1	type IV pilus modification protein PilV	-
BE842_RS14125 (BE842_14125)	fimT	3159070..3159777 (-)	708	WP_080020479.1	GspH/FimT family pseudopilin	Machinery gene
BE842_RS14130 (BE842_14130)	-	3160005..3160865 (-)	861	WP_011214853.1	polysaccharide deacetylase family protein	-
BE842_RS14135 (BE842_14135)	-	3161042..3162391 (-)	1350	WP_080020481.1	lpg0634 family Dot/Icm T4SS effector	-
BE842_RS14140 (BE842_14140)	-	3162685..3164166 (+)	1482	WP_011214855.1	ArnT family glycosyltransferase	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 24931.68 Da
• Isoelectric Point: 8.5054

>NTDB_id=193106 BE842_RS14125 WP_080020479.1 3159070..3159777(-) (fimT) [Legionella pneumophila subsp. pneumophila strain FFI103]
MNKVITESQKFTLRNITNMLFCVKSSVLPAQSNIAQKIQKKGIIYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP

Nucleotide

• Length: 708 bp

>NTDB_id=193106 BE842_RS14125 WP_080020479.1 3159070..3159777(-) (fimT) [Legionella pneumophila subsp. pneumophila strain FFI103]
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACATAACTAATATGTTATTTTGCGTTAAGAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAAAAAAAGGCATAATATACAATGATCTTTGTAAAGACGGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGTTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCGC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGGGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACGACCCAAAGCAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCTCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA

Domains

Predicted by InterproScan.

• Type II transport protein GspH (GspH) (106-208)

• Prokaryotic N-terminal methylation motif (N_methyl) (67-88)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimT	Legionella pneumophila strain Lp02	96.596	100	0.966