Detailed information NTG0193101

Bioinformatically predicted

Overview

• Name: rocC
• Type: Regulator
• Locus tag: BE842_RS11600
• Genome accession: NZ_CP016870
• Coordinates: 2629857..2630549 (+)
• Length: 230 a.a.
• NCBI ID: WP_011214413.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila strain FFI103
• Function: rocR chaperone; repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2624857..2635549

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BE842_RS15760	-	2625474..2625650 (-)	177	WP_011214409.1	dodecin domain-containing protein	-
BE842_RS11585 (BE842_11585)	-	2625828..2628296 (+)	2469	WP_011214410.1	hypothetical protein	-
BE842_RS11590 (BE842_11590)	dapB	2628399..2629130 (-)	732	WP_011214411.1	4-hydroxy-tetrahydrodipicolinate reductase	-
BE842_RS11595 (BE842_11595)	-	2629315..2629500 (-)	186	WP_027266210.1	hypothetical protein	-
BE842_RS11600 (BE842_11600)	rocC	2629857..2630549 (+)	693	WP_011214413.1	ProQ/FINO family protein	Regulator
BE842_RS11605 (BE842_11605)	-	2630550..2631619 (+)	1070	Protein_2293	hypothetical protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 25765.67 Da
• Isoelectric Point: 10.7292

>NTDB_id=193101 BE842_RS11600 WP_011214413.1 2629857..2630549(+) (rocC) [Legionella pneumophila subsp. pneumophila strain FFI103]
MRKQALHPRTAVINKAQKNQSRRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKTREVRIDLLGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSHVNSQSSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETAE

Nucleotide

• Length: 693 bp

>NTDB_id=193101 BE842_RS11600 WP_011214413.1 2629857..2630549(+) (rocC) [Legionella pneumophila subsp. pneumophila strain FFI103]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAGGCGAGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGCCCATTAAAGATTGGTATTA
TGTCCGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAACTCGTGAAGTCCGTATCGATTTGCTCGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAGTCAGTCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCCGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGAGAAAAAGGAAACAGCAGAGTAA

Domains

Predicted by InterproScan.

• ProQ/FINO family (ProQ) (26-132)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rocC	Legionella pneumophila str. Paris	95.652	100	0.957