Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   BE842_RS02675 Genome accession   NZ_CP016870
Coordinates   578935..579276 (+) Length   113 a.a.
NCBI ID   WP_025519545.1    Uniprot ID   A0A128V7G5
Organism   Legionella pneumophila subsp. pneumophila strain FFI103     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 573935..584276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BE842_RS02645 (BE842_02645) fabG 573937..574680 (+) 744 WP_413463057.1 3-oxoacyl-ACP reductase FabG -
  BE842_RS02650 (BE842_02650) acpP 574765..575013 (+) 249 WP_003631752.1 acyl carrier protein -
  BE842_RS02655 (BE842_02655) fabF 575032..576270 (+) 1239 WP_011215413.1 beta-ketoacyl-ACP synthase II -
  BE842_RS02660 (BE842_02660) mltG 576271..577269 (+) 999 WP_011215414.1 endolytic transglycosylase MltG -
  BE842_RS02665 (BE842_02665) tmk 577269..577907 (+) 639 WP_011215415.1 dTMP kinase -
  BE842_RS02670 (BE842_02670) - 577904..578809 (+) 906 WP_011215416.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  BE842_RS02675 (BE842_02675) pilZ 578935..579276 (+) 342 WP_025519545.1 PilZ domain-containing protein Machinery gene
  BE842_RS02680 (BE842_02680) - 579332..580120 (+) 789 WP_011215418.1 TatD family hydrolase -
  BE842_RS02685 (BE842_02685) - 580232..581332 (+) 1101 WP_011215419.1 anhydro-N-acetylmuramic acid kinase -
  BE842_RS02690 (BE842_02690) - 581388..582680 (+) 1293 WP_011215420.1 MFS transporter -
  BE842_RS02695 (BE842_02695) - 582755..584035 (-) 1281 WP_011215421.1 MFS transporter -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=193076 BE842_RS02675 WP_025519545.1 578935..579276(+) (pilZ) [Legionella pneumophila subsp. pneumophila strain FFI103]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=193076 BE842_RS02675 WP_025519545.1 578935..579276(+) (pilZ) [Legionella pneumophila subsp. pneumophila strain FFI103]
ATGACCGAAAAACCACAGCTTATAAATTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGCAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains


Predicted by InterproScan.

(8-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A128V7G5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

100

100

1

  pilZ Legionella pneumophila strain ERS1305867

100

100

1


Multiple sequence alignment