Detailed information NTG0193060

Bioinformatically predicted

Overview

• Name: rocC
• Type: Regulator
• Locus tag: BE841_RS12035
• Genome accession: NZ_CP016868
• Coordinates: 2711954..2712646 (-)
• Length: 230 a.a.
• NCBI ID: WP_011214413.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila strain FFI102
• Function: rocR chaperone; repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2706954..2717646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BE841_RS12030 (BE841_12030)	-	2710883..2711953 (-)	1071	WP_011214414.1	hypothetical protein	-
BE841_RS12035 (BE841_12035)	rocC	2711954..2712646 (-)	693	WP_011214413.1	ProQ/FINO family protein	Regulator
BE841_RS12040 (BE841_12040)	-	2713003..2713188 (+)	186	WP_027266210.1	hypothetical protein	-
BE841_RS12045 (BE841_12045)	dapB	2713373..2714104 (+)	732	WP_011214411.1	4-hydroxy-tetrahydrodipicolinate reductase	-
BE841_RS12050 (BE841_12050)	-	2714207..2716675 (-)	2469	WP_011214410.1	hypothetical protein	-
BE841_RS15780	-	2716853..2717029 (+)	177	WP_011214409.1	dodecin domain-containing protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 25765.67 Da
• Isoelectric Point: 10.7292

>NTDB_id=193060 BE841_RS12035 WP_011214413.1 2711954..2712646(-) (rocC) [Legionella pneumophila subsp. pneumophila strain FFI102]
MRKQALHPRTAVINKAQKNQSRRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKTREVRIDLLGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSHVNSQSSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETAE

Nucleotide

• Length: 693 bp

>NTDB_id=193060 BE841_RS12035 WP_011214413.1 2711954..2712646(-) (rocC) [Legionella pneumophila subsp. pneumophila strain FFI102]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAGGCGAGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGCCCATTAAAGATTGGTATTA
TGTCCGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAACTCGTGAAGTCCGTATCGATTTGCTCGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAGTCAGTCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCCGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGAGAAAAAGGAAACAGCAGAGTAA

Domains

Predicted by InterproScan.

• ProQ/FINO family (ProQ) (26-132)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rocC	Legionella pneumophila str. Paris	95.652	100	0.957