Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | A7U44_RS13410 | Genome accession | NZ_CP016856 |
| Coordinates | 2579816..2580127 (+) | Length | 103 a.a. |
| NCBI ID | WP_000472256.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 2148.N | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2574816..2585127
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7U44_RS13380 (A7U44_1265) | - | 2575599..2575802 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| A7U44_RS13385 (A7U44_1266) | - | 2575799..2576785 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| A7U44_RS13390 (A7U44_1267) | - | 2576785..2577114 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| A7U44_RS13395 (A7U44_1268) | - | 2577111..2577734 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| A7U44_RS13400 (A7U44_1269) | comGA | 2577786..2578760 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A7U44_RS13405 (A7U44_1270) | comGB | 2578732..2579802 (+) | 1071 | WP_000776401.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| A7U44_RS13410 (A7U44_1271) | comGC | 2579816..2580127 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| A7U44_RS13415 (A7U44_1272) | comGD | 2580105..2580551 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| A7U44_RS13420 (A7U44_1273) | comGE | 2580538..2580837 (+) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| A7U44_RS13425 (A7U44_1274) | comGF | 2580755..2581252 (+) | 498 | WP_020978197.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| A7U44_RS13430 (A7U44_04920) | - | 2581349..2581495 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| A7U44_RS13435 (A7U44_1275) | - | 2581485..2582009 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| A7U44_RS13440 (A7U44_1276) | gcvT | 2582168..2583259 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| A7U44_RS13445 (A7U44_1277) | gcvPA | 2583279..2584625 (+) | 1347 | WP_000019681.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11315.36 Da Isoelectric Point: 8.5268
>NTDB_id=192895 A7U44_RS13410 WP_000472256.1 2579816..2580127(+) (comGC) [Staphylococcus aureus strain 2148.N]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=192895 A7U44_RS13410 WP_000472256.1 2579816..2580127(+) (comGC) [Staphylococcus aureus strain 2148.N]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| comGC | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae D39 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae R6 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus mitis SK321 |
51.163 |
83.495 |
0.427 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
51.163 |
83.495 |
0.427 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |