Detailed information NTG0192706

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EC95JB1_RS25290
• Genome accession: NZ_CP021335
• Coordinates: 4741917..4742942 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 95JB1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4736917..4747942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EC95JB1_RS25260 (EC95JB1_03387)	zapB	4737001..4737246 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
EC95JB1_RS25265 (EC95JB1_03388)	rraA	4737331..4737816 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EC95JB1_RS25270 (EC95JB1_03389)	menA	4737909..4738835 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EC95JB1_RS25275 (EC95JB1_03390)	hslU	4738902..4740233 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
EC95JB1_RS25280 (EC95JB1_03391)	hslV	4740243..4740773 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EC95JB1_RS25285 (EC95JB1_03392)	ftsN	4740866..4741825 (-)	960	WP_000068834.1	cell division protein FtsN	-
EC95JB1_RS25290 (EC95JB1_03393)	cytR	4741917..4742942 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EC95JB1_RS25295 (EC95JB1_03394)	priA	4743098..4745296 (-)	2199	WP_001341957.1	primosomal protein N'	Machinery gene
EC95JB1_RS25300 (EC95JB1_03395)	rpmE	4745499..4745711 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=192706 EC95JB1_RS25290 WP_000644904.1 4741917..4742942(-) (cytR) [Escherichia coli strain 95JB1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=192706 EC95JB1_RS25290 WP_000644904.1 4741917..4742942(-) (cytR) [Escherichia coli strain 95JB1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628