Detailed information NTG0192471

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PA45B_RS22840
• Genome accession: NZ_CP021288
• Coordinates: 4417600..4418625 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain PA45B
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4412600..4423625

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PA45B_RS22810 (PA45B_2199)	zapB	4412684..4412929 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
PA45B_RS22815 (PA45B_2198)	rraA	4413014..4413499 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PA45B_RS22820 (PA45B_2197)	menA	4413592..4414518 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PA45B_RS22825 (PA45B_2196)	hslU	4414585..4415916 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
PA45B_RS22830 (PA45B_2195)	hslV	4415926..4416456 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
PA45B_RS22835 (PA45B_2194)	ftsN	4416549..4417508 (-)	960	WP_000068834.1	cell division protein FtsN	-
PA45B_RS22840 (PA45B_2193)	cytR	4417600..4418625 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PA45B_RS22845 (PA45B_2192)	priA	4418781..4420979 (-)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
PA45B_RS22850 (PA45B_2191)	rpmE	4421182..4421394 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
PA45B_RS22855 (PA45B_2190)	yiiX	4421455..4422063 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
PA45B_RS22860 (PA45B_2189)	metJ	4422123..4422440 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=192471 PA45B_RS22840 WP_000644904.1 4417600..4418625(-) (cytR) [Escherichia coli strain PA45B]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=192471 PA45B_RS22840 WP_000644904.1 4417600..4418625(-) (cytR) [Escherichia coli strain PA45B]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628