Detailed information NTG0192441

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: PA45B_RS17275
• Genome accession: NZ_CP021288
• Coordinates: 3336039..3337244 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161829.1
• Uniprot ID: A0A0H2Z2G4
• Organism: Escherichia coli strain PA45B
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3331039..3342244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PA45B_RS17260 (PA45B_3242)	-	3331554..3333230 (+)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-
PA45B_RS17265 (PA45B_3241)	kdsB	3333240..3333980 (+)	741	WP_000030755.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PA45B_RS17270 (PA45B_3240)	-	3333977..3336004 (+)	2028	WP_000579525.1	capsular polysaccharide biosynthesis protein	-
PA45B_RS17275 (PA45B_3239)	kpsS	3336039..3337244 (+)	1206	WP_001161829.1	capsular biosynthesis protein	Regulator
PA45B_RS17280 (PA45B_3238)	-	3337394..3338623 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
PA45B_RS17285 (PA45B_3237)	-	3338613..3339761 (-)	1149	WP_000197083.1	DUF6716 putative glycosyltransferase	-
PA45B_RS17290 (PA45B_3236)	neuC	3339754..3340929 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
PA45B_RS17295 (PA45B_3235)	-	3340926..3342182 (-)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47976.30 Da
• Isoelectric Point: 10.0024

>NTDB_id=192441 PA45B_RS17275 WP_001161829.1 3336039..3337244(+) (kpsS) [Escherichia coli strain PA45B]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEDGVNAYSSLPRDPDFYRKLPDMPTPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLSERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=192441 PA45B_RS17275 WP_001161829.1 3336039..3337244(+) (kpsS) [Escherichia coli strain PA45B]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GTCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCATCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGACGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTACGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGTATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAACGAGTTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTAAGTAAGG
AATATGGCTTAAGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

3D structure

• AlphaFold DB: A0A0H2Z2G4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	40.103	97.007	0.389