Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   BC359_RS14075 Genome accession   NZ_CP016790
Coordinates   2709773..2710723 (-) Length   316 a.a.
NCBI ID   WP_061785366.1    Uniprot ID   A0A1N6XFR8
Organism   Priestia flexa strain KLBMP 4941     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2704773..2715723
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BC359_RS14050 (BC359_13885) - 2706040..2706510 (-) 471 WP_078989961.1 GNAT family N-acetyltransferase -
  BC359_RS14055 (BC359_13890) - 2706671..2706946 (+) 276 WP_025907150.1 DUF4282 domain-containing protein -
  BC359_RS14060 (BC359_13895) - 2706984..2707937 (-) 954 WP_076513262.1 siderophore ABC transporter substrate-binding protein -
  BC359_RS14065 (BC359_13900) - 2708072..2708833 (-) 762 WP_025907148.1 ABC transporter ATP-binding protein -
  BC359_RS14070 (BC359_13905) - 2708830..2709780 (-) 951 WP_061785365.1 iron chelate uptake ABC transporter family permease subunit -
  BC359_RS14075 (BC359_13910) ceuB 2709773..2710723 (-) 951 WP_061785366.1 ABC transporter permease Machinery gene
  BC359_RS14080 (BC359_13915) - 2710984..2711424 (-) 441 WP_078989962.1 MarR family winged helix-turn-helix transcriptional regulator -
  BC359_RS14085 (BC359_13920) - 2711560..2711853 (+) 294 WP_078989963.1 putative quinol monooxygenase -
  BC359_RS14090 (BC359_13925) - 2711979..2712281 (+) 303 WP_061785369.1 DUF6509 family protein -
  BC359_RS14100 (BC359_13935) - 2712798..2713700 (+) 903 WP_078989964.1 AEC family transporter -
  BC359_RS14105 (BC359_13940) - 2713740..2714354 (-) 615 WP_025907132.1 acetate uptake transporter -
  BC359_RS14110 (BC359_13945) - 2714473..2714676 (-) 204 WP_025907130.1 cold-shock protein -
  BC359_RS21795 - 2715015..2715185 (-) 171 WP_167556154.1 hypothetical protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34674.97 Da        Isoelectric Point: 9.5404

>NTDB_id=192277 BC359_RS14075 WP_061785366.1 2709773..2710723(-) (ceuB) [Priestia flexa strain KLBMP 4941]
MKIRYLIILLFLLSLISLFIGVSPVNIYGVLSFDQEQIQVLLISRFPRLISIIIAGVSLSICGLIMQQLTRNKFVSPTTA
GTMDSARLGVLVALMLFTSASPIQKMLVAFVFALIGTFIFMKILDSIKVKDRIFIPLVGLMFGNVIGSITTFFAYKNDLI
QSIGSWLQGDFSTIISGQYELIYLSVPLMIIAYLYANKFTIAGMGEDFATNLGLPFKQVVNIGLVIVALVSSIVLLTVGM
IPFLGLIIPNIVSIYAGDHLKNSLPQTALLGAVFVLTCDILGRVIIYPYEISIGMMVGVIGSGIFLYMLIRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=192277 BC359_RS14075 WP_061785366.1 2709773..2710723(-) (ceuB) [Priestia flexa strain KLBMP 4941]
GTGAAAATTAGGTATCTTATTATTTTACTATTTTTATTATCGCTTATTTCGTTATTTATCGGCGTATCACCAGTAAATAT
TTATGGGGTCTTATCCTTTGATCAAGAGCAAATTCAAGTGCTACTAATTAGTCGTTTTCCACGATTGATTAGCATCATTA
TTGCTGGAGTAAGCTTAAGTATATGTGGATTGATTATGCAGCAGCTGACGAGAAATAAATTTGTTTCTCCGACGACCGCT
GGAACCATGGATTCTGCACGCTTAGGTGTTTTGGTAGCATTGATGTTATTCACATCAGCTAGTCCAATTCAAAAAATGTT
GGTTGCATTTGTTTTCGCTTTAATTGGAACCTTCATCTTTATGAAGATTTTAGATTCTATCAAAGTAAAAGATCGAATTT
TTATTCCTCTTGTTGGTTTGATGTTTGGTAATGTCATTGGTTCCATAACGACATTTTTTGCTTATAAAAATGATTTGATT
CAAAGCATTGGCTCTTGGTTGCAAGGTGATTTCTCTACCATTATTTCAGGACAATATGAGTTAATCTATTTAAGTGTTCC
ACTGATGATTATTGCCTACTTGTATGCTAATAAATTTACGATTGCAGGAATGGGAGAGGACTTTGCTACCAATCTAGGGT
TACCATTTAAGCAGGTTGTGAACATTGGGTTAGTCATCGTAGCACTTGTGTCATCTATCGTACTATTAACGGTTGGAATG
ATTCCTTTTTTAGGATTAATCATTCCGAATATTGTGTCAATATATGCTGGAGATCATTTGAAAAACAGTCTTCCGCAAAC
AGCTTTGCTTGGAGCGGTTTTTGTACTGACTTGTGATATTTTAGGACGAGTTATCATTTATCCATACGAGATTTCCATTG
GTATGATGGTTGGCGTCATTGGTAGTGGGATATTCTTGTACATGTTGATTAGGAGAAAGGCTTATGAGTAA

Domains


Predicted by InterproScan.

(9-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1N6XFR8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522


Multiple sequence alignment