Detailed information
Bioinformatically predicted
Overview
| Name | comFA | Type | Machinery gene |
| Locus tag | BC359_RS02145 | Genome accession | NZ_CP016790 |
| Coordinates | 424485..425972 (+) | Length | 495 a.a. |
| NCBI ID | WP_237071963.1 | Uniprot ID | - |
| Organism | Priestia flexa strain KLBMP 4941 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 419485..430972
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BC359_RS02120 (BC359_02135) | - | 421302..421607 (+) | 306 | WP_025909618.1 | EscU/YscU/HrcU family type III secretion system export apparatus switch protein | - |
| BC359_RS02125 (BC359_02140) | fliS | 421655..422080 (+) | 426 | WP_235932360.1 | flagellar export chaperone FliS | - |
| BC359_RS02130 (BC359_02145) | - | 422097..422918 (+) | 822 | WP_025909620.1 | flagellin | - |
| BC359_RS02135 (BC359_02150) | - | 423000..423437 (+) | 438 | WP_061786279.1 | YaaR family protein | - |
| BC359_RS02140 (BC359_02155) | - | 423554..424399 (+) | 846 | WP_062686858.1 | DegV family protein | - |
| BC359_RS02145 (BC359_02160) | comFA | 424485..425972 (+) | 1488 | WP_237071963.1 | DEAD/DEAH box helicase | Machinery gene |
| BC359_RS02150 (BC359_02165) | - | 426062..426664 (+) | 603 | WP_078989088.1 | ComF family protein | - |
| BC359_RS02155 (BC359_02170) | - | 426722..427123 (+) | 402 | WP_061786276.1 | TIGR03826 family flagellar region protein | - |
| BC359_RS02160 (BC359_02175) | flgM | 427337..427594 (+) | 258 | WP_025909626.1 | flagellar biosynthesis anti-sigma factor FlgM | - |
| BC359_RS02165 (BC359_02180) | - | 427610..428050 (+) | 441 | WP_078989089.1 | flagellar protein FlgN | - |
| BC359_RS02170 (BC359_02185) | flgK | 428071..429585 (+) | 1515 | WP_078989090.1 | flagellar hook-associated protein FlgK | - |
| BC359_RS02175 (BC359_02190) | flgL | 429588..430469 (+) | 882 | WP_078989091.1 | flagellar hook-associated protein FlgL | - |
| BC359_RS02180 (BC359_02195) | - | 430514..430846 (+) | 333 | WP_078989092.1 | DUF6470 family protein | - |
| BC359_RS22660 | - | 430828..430929 (+) | 102 | WP_418312615.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 495 a.a. Molecular weight: 55947.83 Da Isoelectric Point: 9.0552
>NTDB_id=192252 BC359_RS02145 WP_237071963.1 424485..425972(+) (comFA) [Priestia flexa strain KLBMP 4941]
MFLRFILHDNQLVPNGSQEAQAISRLPEWHTPAVNPTFSFNASLQQFLVGKQLLPDELASFSFSTLHEHYEQGYIHYQKS
IVKKDVMTCMRCGNQQQHLFASFHCGRCYSTCTYCRACIGMGRVSECTPLIAWKGPPLREVSSPTLTWKGKLSPAQQTAS
SQMVEAVHSKQELLVWAVCGAGKTEVLFEGISKALDLGKSVCVATPRTDVVLELHPRLQQAFQELEVVALYGGSADKGKH
SSLILTTTHQLLRYYEAFDVMIIDEVDAFPYSAEPMLQYAAHKARKAESTLIYLTATPSENLKQQVKENKLAAVKIPARY
HRYPIPIPRFVWCGNWQKRLVKKKLPFTVLNWIKQRVCDDKQCFVFVPKVKWVQPVVELIQQLTPRVAGVHAEDKERKEK
VKAFREQQYTILVTTTILERGVTVSNIDVAVVGAENEIFTESALVQISGRVGRSANFPTGDVVFFHYGQTVEMKKAKKHM
VDMNDMAKKQGLIQI
MFLRFILHDNQLVPNGSQEAQAISRLPEWHTPAVNPTFSFNASLQQFLVGKQLLPDELASFSFSTLHEHYEQGYIHYQKS
IVKKDVMTCMRCGNQQQHLFASFHCGRCYSTCTYCRACIGMGRVSECTPLIAWKGPPLREVSSPTLTWKGKLSPAQQTAS
SQMVEAVHSKQELLVWAVCGAGKTEVLFEGISKALDLGKSVCVATPRTDVVLELHPRLQQAFQELEVVALYGGSADKGKH
SSLILTTTHQLLRYYEAFDVMIIDEVDAFPYSAEPMLQYAAHKARKAESTLIYLTATPSENLKQQVKENKLAAVKIPARY
HRYPIPIPRFVWCGNWQKRLVKKKLPFTVLNWIKQRVCDDKQCFVFVPKVKWVQPVVELIQQLTPRVAGVHAEDKERKEK
VKAFREQQYTILVTTTILERGVTVSNIDVAVVGAENEIFTESALVQISGRVGRSANFPTGDVVFFHYGQTVEMKKAKKHM
VDMNDMAKKQGLIQI
Nucleotide
Download Length: 1488 bp
>NTDB_id=192252 BC359_RS02145 WP_237071963.1 424485..425972(+) (comFA) [Priestia flexa strain KLBMP 4941]
ATGTTTTTGCGATTTATCCTACATGACAATCAGTTAGTACCGAATGGTTCACAGGAAGCGCAGGCCATTTCACGGCTTCC
TGAATGGCATACACCCGCTGTTAACCCTACATTTTCATTTAATGCAAGCCTCCAGCAATTCCTCGTTGGCAAGCAACTAC
TCCCTGATGAACTAGCTTCATTTTCTTTTTCTACTCTTCATGAACATTACGAACAAGGCTATATCCACTATCAAAAGTCA
ATTGTGAAAAAAGACGTGATGACCTGCATGCGCTGTGGAAATCAGCAGCAGCACTTATTTGCTTCGTTTCACTGTGGTCG
CTGTTACAGCACATGTACGTATTGCCGTGCCTGCATTGGGATGGGGCGGGTATCGGAATGTACGCCTCTTATCGCGTGGA
AAGGGCCTCCTTTACGTGAGGTTTCTTCACCAACTCTTACGTGGAAAGGAAAGCTCTCTCCTGCTCAGCAAACGGCTTCT
AGCCAAATGGTAGAAGCCGTACATTCAAAGCAAGAGCTGCTCGTGTGGGCCGTTTGTGGAGCTGGAAAAACGGAAGTTCT
CTTTGAAGGTATTTCAAAAGCGCTTGATTTGGGTAAATCAGTATGCGTCGCCACGCCGAGAACGGACGTAGTCCTGGAGC
TTCATCCAAGGCTTCAACAAGCGTTTCAAGAGTTGGAAGTAGTGGCTCTTTACGGCGGAAGTGCTGATAAAGGGAAGCAC
TCTTCTCTGATCCTCACAACCACGCATCAGCTTTTGCGTTACTATGAAGCATTTGACGTCATGATCATTGACGAAGTAGA
TGCATTTCCTTATTCAGCAGAACCAATGTTGCAGTATGCTGCCCACAAAGCTCGTAAAGCAGAATCAACCCTTATTTACT
TAACAGCAACTCCCAGTGAAAATCTTAAGCAACAGGTTAAAGAAAATAAGCTAGCAGCTGTCAAAATACCGGCTCGCTAT
CACCGCTATCCCATTCCGATACCTCGTTTTGTATGGTGTGGCAACTGGCAGAAGAGGCTTGTTAAAAAGAAGTTACCTTT
TACCGTATTGAACTGGATCAAGCAGCGAGTGTGTGATGATAAGCAGTGCTTTGTGTTTGTACCAAAGGTCAAATGGGTTC
AGCCCGTTGTAGAACTCATTCAACAGCTAACGCCAAGGGTGGCTGGGGTGCACGCAGAAGATAAAGAGCGAAAAGAAAAG
GTAAAAGCATTTCGTGAGCAGCAGTATACCATTTTGGTTACAACAACCATTTTAGAACGAGGGGTGACTGTCTCTAATAT
TGATGTCGCTGTAGTAGGTGCTGAAAATGAAATTTTCACTGAAAGCGCACTTGTGCAAATTTCAGGCCGAGTTGGTAGAA
GCGCAAACTTTCCAACAGGAGACGTGGTCTTCTTTCACTATGGGCAAACGGTTGAAATGAAAAAAGCGAAAAAGCATATG
GTAGATATGAACGATATGGCAAAAAAACAAGGTCTAATTCAGATATGA
ATGTTTTTGCGATTTATCCTACATGACAATCAGTTAGTACCGAATGGTTCACAGGAAGCGCAGGCCATTTCACGGCTTCC
TGAATGGCATACACCCGCTGTTAACCCTACATTTTCATTTAATGCAAGCCTCCAGCAATTCCTCGTTGGCAAGCAACTAC
TCCCTGATGAACTAGCTTCATTTTCTTTTTCTACTCTTCATGAACATTACGAACAAGGCTATATCCACTATCAAAAGTCA
ATTGTGAAAAAAGACGTGATGACCTGCATGCGCTGTGGAAATCAGCAGCAGCACTTATTTGCTTCGTTTCACTGTGGTCG
CTGTTACAGCACATGTACGTATTGCCGTGCCTGCATTGGGATGGGGCGGGTATCGGAATGTACGCCTCTTATCGCGTGGA
AAGGGCCTCCTTTACGTGAGGTTTCTTCACCAACTCTTACGTGGAAAGGAAAGCTCTCTCCTGCTCAGCAAACGGCTTCT
AGCCAAATGGTAGAAGCCGTACATTCAAAGCAAGAGCTGCTCGTGTGGGCCGTTTGTGGAGCTGGAAAAACGGAAGTTCT
CTTTGAAGGTATTTCAAAAGCGCTTGATTTGGGTAAATCAGTATGCGTCGCCACGCCGAGAACGGACGTAGTCCTGGAGC
TTCATCCAAGGCTTCAACAAGCGTTTCAAGAGTTGGAAGTAGTGGCTCTTTACGGCGGAAGTGCTGATAAAGGGAAGCAC
TCTTCTCTGATCCTCACAACCACGCATCAGCTTTTGCGTTACTATGAAGCATTTGACGTCATGATCATTGACGAAGTAGA
TGCATTTCCTTATTCAGCAGAACCAATGTTGCAGTATGCTGCCCACAAAGCTCGTAAAGCAGAATCAACCCTTATTTACT
TAACAGCAACTCCCAGTGAAAATCTTAAGCAACAGGTTAAAGAAAATAAGCTAGCAGCTGTCAAAATACCGGCTCGCTAT
CACCGCTATCCCATTCCGATACCTCGTTTTGTATGGTGTGGCAACTGGCAGAAGAGGCTTGTTAAAAAGAAGTTACCTTT
TACCGTATTGAACTGGATCAAGCAGCGAGTGTGTGATGATAAGCAGTGCTTTGTGTTTGTACCAAAGGTCAAATGGGTTC
AGCCCGTTGTAGAACTCATTCAACAGCTAACGCCAAGGGTGGCTGGGGTGCACGCAGAAGATAAAGAGCGAAAAGAAAAG
GTAAAAGCATTTCGTGAGCAGCAGTATACCATTTTGGTTACAACAACCATTTTAGAACGAGGGGTGACTGTCTCTAATAT
TGATGTCGCTGTAGTAGGTGCTGAAAATGAAATTTTCACTGAAAGCGCACTTGTGCAAATTTCAGGCCGAGTTGGTAGAA
GCGCAAACTTTCCAACAGGAGACGTGGTCTTCTTTCACTATGGGCAAACGGTTGAAATGAAAAAAGCGAAAAAGCATATG
GTAGATATGAACGATATGGCAAAAAAACAAGGTCTAATTCAGATATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFA | Bacillus subtilis subsp. subtilis str. 168 |
52.516 |
92.323 |
0.485 |