Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | BEN31_RS10790 | Genome accession | NZ_CP016784 |
| Coordinates | 2063178..2063756 (-) | Length | 192 a.a. |
| NCBI ID | WP_034663525.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain PDSLzg-1 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2058178..2068756
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEN31_RS10770 (BEN31_10770) | - | 2058279..2059448 (-) | 1170 | WP_034663515.1 | MFS transporter | - |
| BEN31_RS10775 (BEN31_10775) | - | 2059594..2061033 (+) | 1440 | WP_066031074.1 | PLP-dependent aminotransferase family protein | - |
| BEN31_RS10780 (BEN31_10780) | - | 2061066..2061548 (-) | 483 | WP_066031075.1 | hypothetical protein | - |
| BEN31_RS10785 (BEN31_10785) | - | 2061903..2063009 (-) | 1107 | WP_066031076.1 | D-TA family PLP-dependent enzyme | - |
| BEN31_RS10790 (BEN31_10790) | comK | 2063178..2063756 (-) | 579 | WP_034663525.1 | competence protein ComK | Regulator |
| BEN31_RS10795 (BEN31_10795) | - | 2064046..2064282 (+) | 237 | WP_060595937.1 | IDEAL domain-containing protein | - |
| BEN31_RS10800 (BEN31_10800) | - | 2064338..2065198 (-) | 861 | WP_060595936.1 | SDR family oxidoreductase | - |
| BEN31_RS10805 (BEN31_10805) | - | 2065344..2066876 (+) | 1533 | WP_066031077.1 | FAD-dependent oxidoreductase | - |
| BEN31_RS19700 | - | 2066968..2067507 (+) | 540 | Protein_2176 | protoglobin family protein | - |
| BEN31_RS19705 | - | 2067748..2068263 (+) | 516 | WP_407707228.1 | methyl-accepting chemotaxis protein | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22363.36 Da Isoelectric Point: 7.8904
>NTDB_id=192194 BEN31_RS10790 WP_034663525.1 2063178..2063756(-) (comK) [Bacillus pumilus strain PDSLzg-1]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVELDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVELDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=192194 BEN31_RS10790 WP_034663525.1 2063178..2063756(-) (comK) [Bacillus pumilus strain PDSLzg-1]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GTTGCAGATTCTTCGGCTCAAGCTATGCGGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCTCACAAGCCTCCA
ATTGTGATTGACTCATCCAATCATTTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCGAACTCG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGA
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTTCGGAACAGATATTAA
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GTTGCAGATTCTTCGGCTCAAGCTATGCGGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCTCACAAGCCTCCA
ATTGTGATTGACTCATCCAATCATTTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCGAACTCG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGA
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTTCGGAACAGATATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.979 |
100 |
0.62 |