Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   BEN31_RS10280 Genome accession   NZ_CP016784
Coordinates   1956863..1957528 (-) Length   221 a.a.
NCBI ID   WP_012009573.1    Uniprot ID   -
Organism   Bacillus pumilus strain PDSLzg-1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1951863..1962528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN31_RS10265 (BEN31_10265) pepF 1951894..1953720 (-) 1827 WP_282959022.1 oligoendopeptidase F -
  BEN31_RS10270 (BEN31_10270) - 1953935..1955095 (-) 1161 WP_066031038.1 competence protein CoiA -
  BEN31_RS10275 (BEN31_10275) cls 1955257..1956777 (-) 1521 WP_034663247.1 cardiolipin synthase -
  BEN31_RS10280 (BEN31_10280) mecA 1956863..1957528 (-) 666 WP_012009573.1 adaptor protein MecA Regulator
  BEN31_RS19690 - 1957495..1957615 (-) 121 Protein_2070 hypothetical protein -
  BEN31_RS10285 (BEN31_10285) - 1957791..1958456 (+) 666 WP_060596006.1 TerC family protein -
  BEN31_RS10290 (BEN31_10290) spxA 1958496..1958891 (-) 396 WP_003211421.1 transcriptional regulator SpxA -
  BEN31_RS10295 (BEN31_10295) - 1959085..1959663 (-) 579 WP_060596005.1 GNAT family N-acetyltransferase -
  BEN31_RS10300 (BEN31_10300) - 1959800..1960087 (-) 288 WP_060596004.1 hypothetical protein -
  BEN31_RS10305 (BEN31_10305) - 1960193..1961113 (-) 921 WP_034663259.1 ABC transporter ATP-binding protein -
  BEN31_RS10310 (BEN31_10310) - 1961115..1962194 (-) 1080 WP_034663262.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26405.18 Da        Isoelectric Point: 3.9851

>NTDB_id=192186 BEN31_RS10280 WP_012009573.1 1956863..1957528(-) (mecA) [Bacillus pumilus strain PDSLzg-1]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=192186 BEN31_RS10280 WP_012009573.1 1956863..1957528(-) (mecA) [Bacillus pumilus strain PDSLzg-1]
ATGGAAATCGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAAATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGACCTCTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGACGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGACCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774

Multiple sequence alignment