Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CA923_RS13370 Genome accession   NZ_CP021267
Coordinates   2942254..2943045 (-) Length   263 a.a.
NCBI ID   WP_010948290.1    Uniprot ID   Q5ZSC9
Organism   Legionella pneumophila subsp. pneumophila strain Burlington     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2937254..2948045
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CA923_RS13355 legS1 2938423..2939580 (-) 1158 WP_010948288.1 Dot/Icm T4SS effector LegS1 -
  CA923_RS13365 dacB 2940369..2942162 (-) 1794 WP_010948289.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase -
  CA923_RS13370 spo0J 2942254..2943045 (-) 792 WP_010948290.1 ParB/RepB/Spo0J family partition protein Regulator
  CA923_RS13375 ceg33 2943162..2943659 (-) 498 WP_010948291.1 Dot/Icm T4SS effector Ceg33 -
  CA923_RS13380 - 2943832..2944581 (-) 750 WP_010948292.1 CPBP family glutamic-type intramembrane protease -
  CA923_RS13385 rsmB 2944578..2945861 (-) 1284 WP_010948293.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  CA923_RS13390 fmt 2945858..2946802 (-) 945 WP_010948294.1 methionyl-tRNA formyltransferase -
  CA923_RS13395 def 2946799..2947311 (-) 513 WP_010948295.1 peptide deformylase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30090.26 Da        Isoelectric Point: 5.7320

>NTDB_id=191907 CA923_RS13370 WP_010948290.1 2942254..2943045(-) (spo0J) [Legionella pneumophila subsp. pneumophila strain Burlington]
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGERRWRAAKLAGLNEVPCLIG
DYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKVLSFG
HARVLVGLNPEQQEMFAQQIIGEEWSVRHLEQEIKSYKNKDINSPKNPRKDRDIERLQTILAEQVGAPVQIVNDGEDGGW
LKVKFFDNDTLAGLLERLGLRYD

Nucleotide


Download         Length: 792 bp        

>NTDB_id=191907 CA923_RS13370 WP_010948290.1 2942254..2943045(-) (spo0J) [Legionella pneumophila subsp. pneumophila strain Burlington]
ATGCAAACCCGATTTACTTATTTACCTGTTACAAGCCTGCAGGCAGGTCAGTATCAACCCAGGCAAGATTTTAATGTAAC
GGAGTTACAGGAATTGGCTCAGTCAATTTCTTCCCAGGGTTTAATTGAACCTTTGGTGGTAAGACCCATAGCAAAAGAGC
GATATGAAATTATTGCAGGGGAAAGAAGGTGGCGTGCGGCCAAATTGGCGGGATTAAATGAAGTCCCTTGTTTGATTGGA
GATTATAGTGATCAACAGGCATGTGCTCTCACTTTAATCGAAAATATTCAACGTCAGGATTTGAATTTAATTGAGGAAGC
CACTGGTTATAAGCGTTTAATTGAAGAATTCCATTATCATCAGGACGAGATCGCAGCGTTGGTAGGTAAATCTCGTAGCC
ATGTCGCAAATATTCTTCGTCTCCTTACCTTGACAGATAAGGTTAAACAGTTGGTTCGAGACAAAGTGTTATCCTTTGGA
CATGCTCGTGTATTGGTTGGTTTAAATCCTGAACAACAAGAAATGTTTGCTCAGCAGATTATTGGAGAGGAATGGTCTGT
CAGACACTTAGAGCAAGAAATTAAATCTTATAAAAATAAAGATATAAATAGCCCAAAAAACCCCAGAAAAGACAGAGATA
TTGAGCGGTTACAGACTATCCTGGCTGAACAAGTGGGGGCTCCTGTACAAATTGTAAACGATGGCGAAGACGGAGGTTGG
TTAAAAGTAAAATTTTTTGATAATGATACCCTTGCAGGGCTTTTGGAGCGATTGGGCTTGAGATATGATTAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-96)

HTH domain found in ParB protein (HTH_ParB)

(146-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5ZSC9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

38.077

98.859

0.376