Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   A6L58_RS11265 Genome accession   NZ_CP016682
Coordinates   2151490..2153532 (-) Length   680 a.a.
NCBI ID   WP_002234630.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M24705     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2146490..2158532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L58_RS13410 - 2146520..2147236 (-) 717 WP_029770378.1 secretion protein -
  A6L58_RS13415 - 2147297..2147656 (-) 360 WP_061693024.1 hypothetical protein -
  A6L58_RS14815 (A6L58_11230) - 2147861..2148067 (-) 207 WP_002238305.1 hypothetical protein -
  A6L58_RS11235 (A6L58_11235) - 2148076..2149224 (-) 1149 Protein_2092 JmjC domain-containing protein -
  A6L58_RS11250 (A6L58_11250) - 2149477..2149770 (+) 294 WP_002214458.1 hypothetical protein -
  A6L58_RS11255 (A6L58_11255) argC 2149767..2150810 (+) 1044 WP_002241171.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  A6L58_RS14185 - 2150784..2151032 (-) 249 WP_153308319.1 hypothetical protein -
  A6L58_RS14525 - 2151127..2151273 (-) 147 WP_172586950.1 hypothetical protein -
  A6L58_RS11265 (A6L58_11265) recG 2151490..2153532 (-) 2043 WP_002234630.1 ATP-dependent DNA helicase RecG Machinery gene
  A6L58_RS11270 (A6L58_11270) secB 2153618..2154061 (-) 444 WP_002214461.1 protein-export chaperone SecB -
  A6L58_RS11275 (A6L58_11275) grxC 2154082..2154339 (-) 258 WP_002221441.1 glutaredoxin 3 -
  A6L58_RS11280 (A6L58_11280) rng 2154553..2156046 (+) 1494 WP_002214463.1 ribonuclease G -
  A6L58_RS11285 (A6L58_11285) - 2156081..2157331 (-) 1251 WP_002234629.1 ATP-binding protein -
  A6L58_RS11290 (A6L58_11290) - 2157327..2157502 (-) 176 Protein_2102 response regulator -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74901.85 Da        Isoelectric Point: 7.3729

>NTDB_id=191741 A6L58_RS11265 WP_002234630.1 2151490..2153532(-) (recG) [Neisseria meningitidis strain M24705]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGTA
AALGGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTATETLEQLQTALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEE
DLHLLEQAREIAPLLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=191741 A6L58_RS11265 WP_002234630.1 2151490..2153532(-) (recG) [Neisseria meningitidis strain M24705]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGCCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGTTGATTGTCCAAATC
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAACAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGTATTATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCACACCTCGC
CGAAAGCCTGCGTCTTTTGCATTCGCCGCCGCCGAGTTTCACGATTCATCAGCTTTCAGACGGCACGCTGCCTGCATGGC
AACGGCTCAAATTCGATGAACTTTTGGCGCAACAGCTTTCGATGCGCTTGGCGCGACAGAAGCGTATCGGCGGCACGGCG
GCGGCATTGGGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCGCAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCTACCCGATGCACCGCCTGCTGCAGGGCGATGTCGGCAGCGGCA
AAACCATTGTCGCCGCCTTGTCCGCGCTGACCGCCATCGAATCCGGTGCGCAGGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAACATTTTATTAAATTTAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCCGCCTTTTTGGCAGTTT
GCGTAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGACCATTGTGGACGAACAGCACCGTTTCGGCGTTGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACGAATTGCCGCCCGGGCGCACACCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCGTATTGGGTCTGCCCATTGATT
GAAGAGAGCGAAACCCTGCAACTGCAAACTGCTACCGAAACCCTAGAGCAGCTTCAGACGGCCTTACCCGAACTCAACAT
CGGCTTGGTACACGGGCGCATGAAAGCCGCCGAAAAGGCCGAAGTGATGGCGCGGTTTTCTTCGGGGGGGCTGAACGTCT
TGGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTGCACCAATTACGCGGTCGGGTAGGGCGCGGAGCGGCAGAAAGCGTGTGCGTTCTCCTGTTTGCCGA
GCCATTGAGCGAACTCGCCAAAGCGCGGTTGAAAGTCATCTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGTGCGCGTCAAAGCGGCGTTCCCATGCTGCGTTTTGCCAATCTTGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAATCGCCCCTTTGCTGATTGAACAAAACCCTGAAATCGTCGAAGCCCATTT
GGCACGATGGCTTTCCGGCAGGGAAGGTTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(262-421)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

98.824

100

0.988

Multiple sequence alignment