Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | CA934_RS09090 | Genome accession | NZ_CP021259 |
| Coordinates | 1980268..1982844 (+) | Length | 858 a.a. |
| NCBI ID | WP_027227880.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain D-7708 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1975268..1987844
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA934_RS09060 | - | 1975535..1975900 (-) | 366 | WP_106225387.1 | iron-sulfur cluster assembly accessory protein | - |
| CA934_RS09065 | - | 1975905..1976288 (-) | 384 | WP_027227885.1 | iron-sulfur cluster assembly scaffold protein | - |
| CA934_RS09070 | - | 1976285..1977418 (-) | 1134 | WP_269569230.1 | IscS subfamily cysteine desulfurase | - |
| CA934_RS09075 | trmJ | 1977423..1978196 (-) | 774 | WP_010947473.1 | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | - |
| CA934_RS09080 | - | 1978312..1979097 (+) | 786 | WP_106225388.1 | inositol monophosphatase family protein | - |
| CA934_RS09085 | - | 1979223..1980179 (-) | 957 | WP_106225389.1 | S49 family peptidase | - |
| CA934_RS09090 | clpC | 1980268..1982844 (+) | 2577 | WP_027227880.1 | ATP-dependent chaperone ClpB | Regulator |
| CA934_RS09095 | - | 1982938..1984251 (-) | 1314 | WP_027227879.1 | lpg1751 family Dot/Icm T4SS effector | - |
| CA934_RS09100 | - | 1984264..1984911 (-) | 648 | WP_080272157.1 | lpg1752 family Dot/Icm T4SS effector | - |
| CA934_RS09105 | mpl | 1985067..1986452 (-) | 1386 | WP_027227877.1 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | - |
| CA934_RS09110 | - | 1986454..1987002 (-) | 549 | WP_028378109.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 858 a.a. Molecular weight: 95806.65 Da Isoelectric Point: 5.3681
>NTDB_id=191471 CA934_RS09090 WP_027227880.1 1980268..1982844(+) (clpC) [Legionella pneumophila strain D-7708]
MRMDKLTSKFQMALAEAQSLALGRDNGFIEPEHLMKALLDQQGGSCRPLLSKAGVNIPLLRTLIDQALDKLPKVSGTGGD
IHISNALNRLLNLTDKLSQQRKDNFISSELFILAAINEDSNLAKILKQAGGDNKAIEKAIDELRGGETVNDPNAEEQRQA
LEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLAL
DMGALIAGAKYRGEFEERLKGVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYR
QYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHRYISDRQLPDKAIDLIDEAASL
IRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALE
QAKLEMETARRAGDLSRMSELQYGRIPELEKRLSQVSSVDAMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEKLL
KMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEK
HSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNL
GSQLIQEMSSKFDYDQIKAAVMDLVSQHFRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSEAL
SHLAEAGFDPVYGARPLKRTIQQKLENPLAQSLLTGKFKSGETIIVSYKDGVMEFSKQ
MRMDKLTSKFQMALAEAQSLALGRDNGFIEPEHLMKALLDQQGGSCRPLLSKAGVNIPLLRTLIDQALDKLPKVSGTGGD
IHISNALNRLLNLTDKLSQQRKDNFISSELFILAAINEDSNLAKILKQAGGDNKAIEKAIDELRGGETVNDPNAEEQRQA
LEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLAL
DMGALIAGAKYRGEFEERLKGVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYR
QYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHRYISDRQLPDKAIDLIDEAASL
IRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALE
QAKLEMETARRAGDLSRMSELQYGRIPELEKRLSQVSSVDAMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEKLL
KMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEK
HSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNL
GSQLIQEMSSKFDYDQIKAAVMDLVSQHFRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSEAL
SHLAEAGFDPVYGARPLKRTIQQKLENPLAQSLLTGKFKSGETIIVSYKDGVMEFSKQ
Nucleotide
Download Length: 2577 bp
>NTDB_id=191471 CA934_RS09090 WP_027227880.1 1980268..1982844(+) (clpC) [Legionella pneumophila strain D-7708]
ATGCGAATGGACAAACTAACATCAAAGTTTCAAATGGCTCTTGCAGAGGCCCAATCCCTGGCCTTAGGTAGAGATAATGG
ATTTATAGAACCAGAACATTTAATGAAAGCCTTACTCGATCAACAAGGTGGAAGTTGCAGACCTCTTCTCAGTAAAGCGG
GTGTTAATATACCACTATTAAGAACCTTAATTGACCAAGCTCTGGATAAACTCCCTAAAGTATCAGGTACCGGAGGAGAT
ATTCATATATCTAATGCGTTGAATAGACTACTTAACCTGACTGACAAATTATCGCAACAAAGAAAAGATAACTTTATTTC
AAGTGAGCTTTTTATATTAGCAGCGATAAATGAGGATAGTAACCTTGCGAAAATACTCAAGCAAGCCGGAGGTGACAACA
AAGCCATTGAAAAAGCGATTGATGAGTTAAGAGGCGGAGAAACTGTTAATGATCCAAATGCAGAGGAACAGCGACAAGCC
CTTGAAAAATATACCCTGGATTTGACTGAACGTGCTGAGCAAGGAAAACTAGACCCAGTTATTGGACGAGATGATGAAAT
TCGACGCACCATCCAGGTATTGCAAAGAAGAACCAAAAATAACCCTGTATTAATAGGTGAACCTGGTGTAGGTAAAACAG
CTATAGTAGAAGGTTTGGCGCAACGAATTATTAATGGTGAAGTGCCTGAAGGATTAAAGAATAAACGCTTACTGGCACTG
GACATGGGAGCTTTGATCGCGGGTGCAAAATATCGCGGAGAGTTTGAAGAACGTTTAAAAGGAGTTCTTAATGATTTGGC
AAAACAAGAAGGTCAAATCATATTGTTTATTGATGAATTGCATACTATGGTCGGCGCTGGCAAGGCTGAAGGAGCTATGG
ATGCCGGGAATATGCTCAAACCAGCATTGGCTAGAGGTGAATTGCATTGCATTGGGGCTACGACATTAGACGAATACCGA
CAATACATTGAAAAAGATGCTGCCCTTGAAAGACGCTTTCAAAAAGTACTGGTCGATGAACCCAGTGTGGAAGACACCAT
TGCTATATTAAGGGGTCTTAAAGAACGATATGAAGTTCACCATGGAGTTGAAATTACAGATCCTGCTTTGGTTGCTGCAG
CAACGCTATCCCATCGATATATCAGTGACCGCCAACTACCCGACAAAGCCATTGATTTAATTGATGAAGCAGCCAGCTTA
ATCCGGATGGAAATTGATTCAAAACCTGAAAGTATGGATAAACTGGAACGACGTTTGATTCAGCTAAAAATCGAGCGTGA
AGCATTGAAAAAGGAAAATGACGAAGCGTCTAAAAAAAGACTTGTTGATTTACAAAAAAGTATCGATGAATTAGAGCAAA
ATTATTCAGACTTAGAGGAGATTTGGAAAGCTGAAAAAGCGACCATGCAAGGGTCCACCCAAATCAAGGAAGCACTTGAA
CAAGCCAAACTGGAAATGGAAACTGCCAGGAGAGCAGGAGATTTAAGTCGTATGTCTGAATTACAATATGGACGTATACC
CGAGTTGGAAAAGAGATTAAGCCAGGTCTCTTCAGTCGATGCTATGGAAACAAAGTTGGTACGCAATAAAGTCACCGAAG
ATGAGATTGCAGAAGTTGTTTCAAAATGGACAGGGATCCCCGTATCTAAAATGATGGAAGGGGAAAAGGAAAAATTACTG
AAAATGGAAGAAGCTTTGCATAGCAGGCTCATCGGCCAAAATGAAGCAGTAGATGCTGTTTCTAATGCCATAAGACGGTC
ACGTGCAGGGCTATCCGATCCTAATCGTCCAATTGGTTCGTTTCTTTTTCTGGGTCCAACCGGTGTAGGAAAAACCGAAT
TATGTAAAGCACTCGCTTCTTTTCTTTTTGATACGGAAGAAGCTATGGTGCGCATTGATATGTCTGAATTTATGGAAAAA
CACTCTGTGGCACGCTTAATCGGCGCGCCTCCTGGCTACGTAGGATATGAAGAAGGTGGCTATTTAACTGAGGCAGTCAG
ACGCAGGCCCTATTCTGTTATCTTGCTCGATGAAGTAGAAAAAGCTCATACCGACGTATTTAATATTCTGCTTCAAGTTA
TGGATGATGGCCGTTTAACAGATGGTCAGGGACGTACTGTTGACTTTAGGAATACCGTTATTGTTATGACCTCTAATCTG
GGATCTCAACTCATTCAGGAAATGAGCAGCAAATTTGATTACGATCAGATTAAGGCTGCGGTAATGGATTTAGTCAGCCA
ACATTTTAGACCTGAATTTATCAACAGAATTGATGAATCGGTGGTATTCCATTCCCTGACAAAAGAACAAATTGCAAAAA
TTGCAGCAATCCAGATTAACTATTTACATCATCGGCTGAAACAACAAAACATCACTCTTGAAGTCACAAGTGAGGCTTTA
TCTCATTTGGCTGAAGCAGGTTTTGATCCGGTCTATGGTGCCCGCCCCTTAAAACGTACCATTCAGCAAAAATTAGAGAA
TCCACTGGCGCAATCATTATTGACTGGAAAATTCAAATCAGGGGAAACCATCATTGTATCTTATAAAGATGGAGTAATGG
AATTTTCCAAGCAATGA
ATGCGAATGGACAAACTAACATCAAAGTTTCAAATGGCTCTTGCAGAGGCCCAATCCCTGGCCTTAGGTAGAGATAATGG
ATTTATAGAACCAGAACATTTAATGAAAGCCTTACTCGATCAACAAGGTGGAAGTTGCAGACCTCTTCTCAGTAAAGCGG
GTGTTAATATACCACTATTAAGAACCTTAATTGACCAAGCTCTGGATAAACTCCCTAAAGTATCAGGTACCGGAGGAGAT
ATTCATATATCTAATGCGTTGAATAGACTACTTAACCTGACTGACAAATTATCGCAACAAAGAAAAGATAACTTTATTTC
AAGTGAGCTTTTTATATTAGCAGCGATAAATGAGGATAGTAACCTTGCGAAAATACTCAAGCAAGCCGGAGGTGACAACA
AAGCCATTGAAAAAGCGATTGATGAGTTAAGAGGCGGAGAAACTGTTAATGATCCAAATGCAGAGGAACAGCGACAAGCC
CTTGAAAAATATACCCTGGATTTGACTGAACGTGCTGAGCAAGGAAAACTAGACCCAGTTATTGGACGAGATGATGAAAT
TCGACGCACCATCCAGGTATTGCAAAGAAGAACCAAAAATAACCCTGTATTAATAGGTGAACCTGGTGTAGGTAAAACAG
CTATAGTAGAAGGTTTGGCGCAACGAATTATTAATGGTGAAGTGCCTGAAGGATTAAAGAATAAACGCTTACTGGCACTG
GACATGGGAGCTTTGATCGCGGGTGCAAAATATCGCGGAGAGTTTGAAGAACGTTTAAAAGGAGTTCTTAATGATTTGGC
AAAACAAGAAGGTCAAATCATATTGTTTATTGATGAATTGCATACTATGGTCGGCGCTGGCAAGGCTGAAGGAGCTATGG
ATGCCGGGAATATGCTCAAACCAGCATTGGCTAGAGGTGAATTGCATTGCATTGGGGCTACGACATTAGACGAATACCGA
CAATACATTGAAAAAGATGCTGCCCTTGAAAGACGCTTTCAAAAAGTACTGGTCGATGAACCCAGTGTGGAAGACACCAT
TGCTATATTAAGGGGTCTTAAAGAACGATATGAAGTTCACCATGGAGTTGAAATTACAGATCCTGCTTTGGTTGCTGCAG
CAACGCTATCCCATCGATATATCAGTGACCGCCAACTACCCGACAAAGCCATTGATTTAATTGATGAAGCAGCCAGCTTA
ATCCGGATGGAAATTGATTCAAAACCTGAAAGTATGGATAAACTGGAACGACGTTTGATTCAGCTAAAAATCGAGCGTGA
AGCATTGAAAAAGGAAAATGACGAAGCGTCTAAAAAAAGACTTGTTGATTTACAAAAAAGTATCGATGAATTAGAGCAAA
ATTATTCAGACTTAGAGGAGATTTGGAAAGCTGAAAAAGCGACCATGCAAGGGTCCACCCAAATCAAGGAAGCACTTGAA
CAAGCCAAACTGGAAATGGAAACTGCCAGGAGAGCAGGAGATTTAAGTCGTATGTCTGAATTACAATATGGACGTATACC
CGAGTTGGAAAAGAGATTAAGCCAGGTCTCTTCAGTCGATGCTATGGAAACAAAGTTGGTACGCAATAAAGTCACCGAAG
ATGAGATTGCAGAAGTTGTTTCAAAATGGACAGGGATCCCCGTATCTAAAATGATGGAAGGGGAAAAGGAAAAATTACTG
AAAATGGAAGAAGCTTTGCATAGCAGGCTCATCGGCCAAAATGAAGCAGTAGATGCTGTTTCTAATGCCATAAGACGGTC
ACGTGCAGGGCTATCCGATCCTAATCGTCCAATTGGTTCGTTTCTTTTTCTGGGTCCAACCGGTGTAGGAAAAACCGAAT
TATGTAAAGCACTCGCTTCTTTTCTTTTTGATACGGAAGAAGCTATGGTGCGCATTGATATGTCTGAATTTATGGAAAAA
CACTCTGTGGCACGCTTAATCGGCGCGCCTCCTGGCTACGTAGGATATGAAGAAGGTGGCTATTTAACTGAGGCAGTCAG
ACGCAGGCCCTATTCTGTTATCTTGCTCGATGAAGTAGAAAAAGCTCATACCGACGTATTTAATATTCTGCTTCAAGTTA
TGGATGATGGCCGTTTAACAGATGGTCAGGGACGTACTGTTGACTTTAGGAATACCGTTATTGTTATGACCTCTAATCTG
GGATCTCAACTCATTCAGGAAATGAGCAGCAAATTTGATTACGATCAGATTAAGGCTGCGGTAATGGATTTAGTCAGCCA
ACATTTTAGACCTGAATTTATCAACAGAATTGATGAATCGGTGGTATTCCATTCCCTGACAAAAGAACAAATTGCAAAAA
TTGCAGCAATCCAGATTAACTATTTACATCATCGGCTGAAACAACAAAACATCACTCTTGAAGTCACAAGTGAGGCTTTA
TCTCATTTGGCTGAAGCAGGTTTTGATCCGGTCTATGGTGCCCGCCCCTTAAAACGTACCATTCAGCAAAAATTAGAGAA
TCCACTGGCGCAATCATTATTGACTGGAAAATTCAAATCAGGGGAAACCATCATTGTATCTTATAAAGATGGAGTAATGG
AATTTTCCAAGCAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
46.951 |
100 |
0.476 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
41.176 |
100 |
0.416 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
46.454 |
80.536 |
0.374 |
| clpE | Streptococcus pneumoniae D39 |
45.428 |
80.303 |
0.365 |
| clpE | Streptococcus pneumoniae R6 |
45.428 |
80.303 |
0.365 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.428 |
80.303 |
0.365 |
| clpE | Streptococcus pneumoniae Rx1 |
45.428 |
80.303 |
0.365 |
| clpE | Streptococcus mutans UA159 |
46.097 |
79.138 |
0.365 |