Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   A6L42_RS05400 Genome accession   NZ_CP016671
Coordinates   1019366..1019827 (+) Length   153 a.a.
NCBI ID   WP_002234056.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22783     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1014366..1024827
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L42_RS05375 (A6L42_05375) - 1015501..1015710 (-) 210 WP_002212949.1 tautomerase family protein -
  A6L42_RS05380 (A6L42_05380) - 1016055..1016861 (+) 807 WP_002212946.1 DUF4198 domain-containing protein -
  A6L42_RS05385 (A6L42_05385) - 1016919..1018184 (-) 1266 WP_002257138.1 Glu/Leu/Phe/Val family dehydrogenase -
  A6L42_RS05395 (A6L42_05395) - 1018591..1019298 (+) 708 WP_002219041.1 phosphoglycolate phosphatase -
  A6L42_RS05400 (A6L42_05400) recX 1019366..1019827 (+) 462 WP_002234056.1 recombination regulator RecX Regulator
  A6L42_RS13820 (A6L42_05405) - 1019901..1020062 (+) 162 WP_002237185.1 hypothetical protein -
  A6L42_RS05415 (A6L42_05415) - 1020215..1020697 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  A6L42_RS05420 (A6L42_05420) - 1021058..1022305 (-) 1248 WP_065821554.1 M23 family metallopeptidase -
  A6L42_RS05425 (A6L42_05425) surE 1022561..1023307 (-) 747 WP_002251985.1 5'/3'-nucleotidase SurE -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17731.06 Da        Isoelectric Point: 10.0960

>NTDB_id=191201 A6L42_RS05400 WP_002234056.1 1019366..1019827(+) (recX) [Neisseria meningitidis strain M22783]
MKPQKSLRARAMDILSRQELSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=191201 A6L42_RS05400 WP_002234056.1 1019366..1019827(+) (recX) [Neisseria meningitidis strain M22783]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAACTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

97.386

100

0.974

Multiple sequence alignment