Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   A6L42_RS00220 Genome accession   NZ_CP016671
Coordinates   52322..54364 (+) Length   680 a.a.
NCBI ID   WP_002234630.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22783     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 47322..59364
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L42_RS00195 (A6L42_00195) - 48352..48527 (+) 176 Protein_36 response regulator -
  A6L42_RS00200 (A6L42_00200) - 48523..49773 (+) 1251 WP_002234629.1 ATP-binding protein -
  A6L42_RS00205 (A6L42_00205) rng 49808..51301 (-) 1494 WP_002214463.1 ribonuclease G -
  A6L42_RS00210 (A6L42_00210) grxC 51515..51772 (+) 258 WP_002221441.1 glutaredoxin 3 -
  A6L42_RS00215 (A6L42_00215) secB 51793..52236 (+) 444 WP_002214461.1 protein-export chaperone SecB -
  A6L42_RS00220 (A6L42_00220) recG 52322..54364 (+) 2043 WP_002234630.1 ATP-dependent DNA helicase RecG Machinery gene
  A6L42_RS00230 (A6L42_00230) argC 55119..56162 (-) 1044 WP_002256893.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  A6L42_RS14465 - 56300..56440 (-) 141 WP_002234632.1 hypothetical protein -
  A6L42_RS00245 (A6L42_00245) - 56693..57847 (+) 1155 WP_002234252.1 cupin domain-containing protein -
  A6L42_RS14470 (A6L42_00250) - 57856..58083 (+) 228 WP_002234251.1 hypothetical protein -
  A6L42_RS00255 (A6L42_00255) - 58076..58429 (+) 354 WP_002234250.1 hypothetical protein -
  A6L42_RS00260 (A6L42_00260) - 58490..59116 (+) 627 WP_002234634.1 secretion protein -
  A6L42_RS14820 - 59020..59229 (+) 210 Protein_48 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74901.85 Da        Isoelectric Point: 7.3729

>NTDB_id=191185 A6L42_RS00220 WP_002234630.1 52322..54364(+) (recG) [Neisseria meningitidis strain M22783]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGTA
AALGGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTATETLEQLQTALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEE
DLHLLEQAREIAPLLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=191185 A6L42_RS00220 WP_002234630.1 52322..54364(+) (recG) [Neisseria meningitidis strain M22783]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGCCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGTTGATTGTCCAAATC
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAACAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGTATTATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCACACCTCGC
CGAAAGCCTGCGTCTTTTGCATTCGCCGCCGCCGAGTTTCACGATTCATCAGCTTTCAGACGGCACGCTGCCTGCATGGC
AACGGCTCAAATTCGATGAACTTTTGGCGCAACAGCTTTCGATGCGCTTGGCGCGACAGAAGCGTATCGGCGGCACGGCG
GCGGCATTGGGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCGCAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCTACCCGATGCACCGCCTGCTGCAGGGCGATGTCGGCAGCGGCA
AAACCATTGTCGCCGCCTTGTCCGCGCTGACCGCCATCGAATCCGGTGCGCAGGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAACATTTTATTAAATTTAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCCGCCTTTTTGGCAGTTT
GCGTAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGACCATTGTGGACGAACAGCACCGTTTCGGCGTTGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACGAATTGCCGCCCGGGCGCACACCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCGTATTGGGTCTGCCCATTGATT
GAAGAGAGCGAAACCCTGCAACTGCAAACTGCTACCGAAACCCTAGAGCAGCTTCAGACGGCCTTACCCGAACTCAACAT
CGGCTTGGTACACGGGCGCATGAAAGCCGCCGAAAAGGCCGAAGTGATGGCGCGGTTTTCTTCGGGGGGGCTGAACGTCT
TGGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTGCACCAATTACGCGGTCGGGTAGGGCGCGGAGCGGCAGAAAGCGTGTGCGTTCTCCTGTTTGCCGA
GCCATTGAGCGAACTCGCCAAAGCGCGGTTGAAAGTCATCTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGTGCGCGTCAAAGCGGCGTTCCCATGCTGCGTTTTGCCAATCTTGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAATCGCCCCTTTGCTGATTGAACAAAACCCTGAAATCGTCGAAGCCCATTT
GGCACGATGGCTTTCCGGCAGGGAAGGTTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(262-421)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

98.824

100

0.988

Multiple sequence alignment