Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CAC37_RS03165 Genome accession   NZ_CP021178
Coordinates   669616..670290 (+) Length   224 a.a.
NCBI ID   WP_096002288.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus ST398 strain 2012-3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 664616..675290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAC37_RS03140 (CAC37_03270) - 664831..665898 (+) 1068 WP_000980142.1 membrane protein -
  CAC37_RS03145 (CAC37_03275) - 666049..667092 (+) 1044 WP_001030759.1 alpha/beta hydrolase -
  CAC37_RS03150 (CAC37_03285) - 667422..667850 (+) 429 WP_000198503.1 hypothetical protein -
  CAC37_RS03155 (CAC37_03290) - 668058..668564 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  CAC37_RS03160 (CAC37_03295) graX 668677..669600 (+) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  CAC37_RS03165 (CAC37_03300) braR 669616..670290 (+) 675 WP_096002288.1 response regulator transcription factor GraR/ApsR Regulator
  CAC37_RS03170 (CAC37_03305) graS 670283..671323 (+) 1041 WP_001061267.1 histidine kinase GraS/ApsS -
  CAC37_RS03175 (CAC37_03310) vraF 671470..672231 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  CAC37_RS03180 (CAC37_03315) - 672221..674110 (+) 1890 WP_000009400.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26076.94 Da        Isoelectric Point: 4.4019

>NTDB_id=191035 CAC37_RS03165 WP_096002288.1 669616..670290(+) (braR) [Staphylococcus aureus subsp. aureus ST398 strain 2012-3]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNIPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGEQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=191035 CAC37_RS03165 WP_096002288.1 669616..670290(+) (braR) [Staphylococcus aureus subsp. aureus ST398 strain 2012-3]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACATACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCGAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.364

98.214

0.406

Multiple sequence alignment