Detailed information    

insolico Bioinformatically predicted

Overview


Name   tpc   Type   Machinery gene
Locus tag   A6L64_RS08230 Genome accession   NZ_CP016664
Coordinates   1624850..1625848 (-) Length   332 a.a.
NCBI ID   WP_002221268.1    Uniprot ID   A0AAD2J6P7
Organism   Neisseria meningitidis strain M25070     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context


Location: 1619850..1630848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L64_RS08210 (A6L64_08210) - 1621228..1621854 (-) 627 WP_002221271.1 phosphoribosylanthranilate isomerase -
  A6L64_RS08215 (A6L64_08215) greB 1621913..1622404 (-) 492 WP_002214159.1 transcription elongation factor GreB -
  A6L64_RS08220 (A6L64_08220) purF 1622504..1624048 (-) 1545 WP_002221269.1 amidophosphoribosyltransferase -
  A6L64_RS13600 - 1624193..1624363 (-) 171 WP_153308407.1 hypothetical protein -
  A6L64_RS08225 (A6L64_08225) - 1624360..1624857 (-) 498 WP_002214153.1 CvpA family protein -
  A6L64_RS08230 (A6L64_08230) tpc 1624850..1625848 (-) 999 WP_002221268.1 cell division protein FtsN Machinery gene
  A6L64_RS08235 (A6L64_08235) folC 1625861..1627135 (-) 1275 WP_002221267.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  A6L64_RS08240 (A6L64_08240) - 1627167..1627607 (-) 441 WP_002221266.1 protein YgfX -
  A6L64_RS08245 (A6L64_08245) - 1627612..1627971 (-) 360 WP_002221265.1 hypothetical protein -
  A6L64_RS08250 (A6L64_08250) - 1628044..1628772 (-) 729 WP_002217681.1 amino acid ABC transporter ATP-binding protein -
  A6L64_RS08255 (A6L64_08255) rsmA 1628945..1629724 (-) 780 WP_002221264.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  A6L64_RS08260 (A6L64_08260) - 1629921..1630631 (+) 711 WP_002221263.1 uracil-DNA glycosylase family protein -

Sequence


Protein


Download         Length: 332 a.a.        Molecular weight: 35577.94 Da        Isoelectric Point: 10.1759

>NTDB_id=190891 A6L64_RS08230 WP_002221268.1 1624850..1625848(-) (tpc) [Neisseria meningitidis strain M25070]
MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSSGPAEQTAGETNGVENKAAGAAQTPALKSAADKPQDL
AGEDKPSAADSEISEPENVGAPLVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKP
KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKETKKADKAESKKTAEKDRSDGKKHETA
QKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKL
RVHGIAGQVTNE

Nucleotide


Download         Length: 999 bp        

>NTDB_id=190891 A6L64_RS08230 WP_002221268.1 1624850..1625848(-) (tpc) [Neisseria meningitidis strain M25070]
ATGTCCGAAAACAAACAAAACGAAGTCCTGAGCGGTTACGAACAACTCAAACGGCGCAACCGCCGCCGCCTCGTAACGGC
AAGTTGCCTGGTTGCCGCCTCCTGCATCCTGCTGGCAGCCGCCCTCAGTTCCGGCCCTGCCGAACAGACTGCCGGCGAAA
CAAACGGCGTAGAAAACAAAGCGGCAGGTGCGGCACAAACCCCTGCCTTGAAATCCGCCGCCGACAAACCGCAGGACTTG
GCAGGCGAAGACAAGCCTTCTGCCGCCGACAGCGAAATCAGCGAGCCTGAAAACGTAGGCGCGCCGCTGGTGCTGATTAA
CGACCGCCTCGAAGACAGCAACATCAAAGGTTTGGAAGCATCCGAGAAACTGCAACAGGCAGAAACCGCCAAAACCGCAC
CGAAGCAGGCAAAACAACGCGCTGCCGAAAAAGTGCCGGCAACTGCCGACAGTACGGATACGGTAGCGGTTGAAAAACCG
AAACGCACTGCCGAAACAAAACCGCAAAAAGCGGAACGCACTGCCAAAGCCAAGCCCAAAGCCAAAGAAACCAAAACCGC
CGAAAAAGTTGCCGACAAACCGAAAACTGCCGCCGAAAAAACCAAACCGGATACGGCAAAATCCGACAGCGCGGTAAAAG
AAACGAAAAAAGCCGACAAGGCTGAAAGCAAAAAAACAGCCGAAAAAGACCGTTCGGACGGCAAAAAACACGAAACGGCA
CAAAAAACCGACAAAGCGGACAAGACCAAAACCGCCGAGAAGGAAAAATCCGGTAAAAAAGCCGCCATTCAGGCAGGTTA
TGCCGAAAAAGAACGCGCCTTAAGCCTCCAGCGCAAAATGAAAGCGGCGGGTATCGATTCGACCATCACCGAAATTATGA
CCGACAACGGCAAAGTTTACCGCGTCAAATCAAGCAACTATAAAAACGCAAGGGATGCCGAACGCGATTTGAACAAATTG
CGCGTACACGGTATCGCCGGTCAGGTAACGAATGAATAA

Domains


Predicted by InterproScan.

(259-330)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

89.595

100

0.934


Multiple sequence alignment