Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   B9N48_RS20155 Genome accession   NZ_CP021169
Coordinates   3861488..3862282 (-) Length   264 a.a.
NCBI ID   WP_046381476.1    Uniprot ID   -
Organism   Bacillus subtilis strain TLO3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3856488..3867282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9N48_RS20135 rocD 3856942..3858147 (-) 1206 WP_003226954.1 ornithine aminotransferase -
  B9N48_RS20140 rocR 3858385..3859770 (+) 1386 WP_015385164.1 arginine utilization regulatory protein RocR -
  B9N48_RS20145 - 3859752..3859946 (-) 195 Protein_3918 ATP-binding protein -
  B9N48_RS20760 - 3860057..3860183 (-) 127 Protein_3919 hypothetical protein -
  B9N48_RS20150 htrA 3860204..3861406 (-) 1203 WP_046381475.1 serine protease HtrC Regulator
  B9N48_RS20155 vicX 3861488..3862282 (-) 795 WP_046381476.1 MBL fold metallo-hydrolase Regulator
  B9N48_RS20160 walI 3862304..3863146 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  B9N48_RS20165 walH 3863133..3864500 (-) 1368 WP_042976993.1 WalRK two-component regulatory system regulator WalH -
  B9N48_RS20170 walK 3864490..3866325 (-) 1836 WP_024572714.1 cell wall metabolism sensor histidine kinase WalK -
  B9N48_RS20175 walR 3866333..3867040 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29315.34 Da        Isoelectric Point: 5.8036

>NTDB_id=190848 B9N48_RS20155 WP_046381476.1 3861488..3862282(-) (vicX) [Bacillus subtilis strain TLO3]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFMTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=190848 B9N48_RS20155 WP_046381476.1 3861488..3862282(-) (vicX) [Bacillus subtilis strain TLO3]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTAAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCCGAACCGATGTTTTATGTGTTTC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTATGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53