Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   B9N48_RS17405 Genome accession   NZ_CP021169
Coordinates   3325406..3326119 (-) Length   237 a.a.
NCBI ID   WP_015384738.1    Uniprot ID   -
Organism   Bacillus subtilis strain TLO3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3320406..3331119
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9N48_RS17385 ghrB 3320550..3321527 (+) 978 WP_015251153.1 D-glycerate dehydrogenase -
  B9N48_RS17390 psdB 3321565..3323505 (-) 1941 WP_024571588.1 lantibiotic ABC transporter permease PsdB -
  B9N48_RS17395 psdA 3323480..3324259 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  B9N48_RS17400 psdS 3324342..3325412 (-) 1071 WP_086344360.1 two-component sensor histidine kinase PsdS -
  B9N48_RS17405 braR 3325406..3326119 (-) 714 WP_015384738.1 two-component system response regulator PsdR Regulator
  B9N48_RS17410 - 3326266..3326475 (+) 210 WP_029318346.1 hypothetical protein -
  B9N48_RS17415 yvcN 3326509..3327273 (-) 765 WP_086344361.1 arylamine N-acetyltransferase -
  B9N48_RS17420 crh 3327274..3327531 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  B9N48_RS17425 whiA 3327555..3328505 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  B9N48_RS17430 mgfK 3328528..3329481 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  B9N48_RS17435 rapZ 3329483..3330370 (-) 888 WP_003243903.1 RNase adapter RapZ -
  B9N48_RS17440 rppI 3330395..3330871 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27529.40 Da        Isoelectric Point: 4.6774

>NTDB_id=190831 B9N48_RS17405 WP_015384738.1 3325406..3326119(-) (braR) [Bacillus subtilis strain TLO3]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=190831 B9N48_RS17405 WP_015384738.1 3325406..3326119(-) (braR) [Bacillus subtilis strain TLO3]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTTCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment