Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   B9N48_RS15055 Genome accession   NZ_CP021169
Coordinates   2879913..2880608 (-) Length   231 a.a.
NCBI ID   WP_048655237.1    Uniprot ID   -
Organism   Bacillus subtilis strain TLO3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2874913..2885608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9N48_RS15035 yttA 2875340..2876086 (+) 747 WP_086344220.1 LMBR1 domain-containing protein -
  B9N48_RS15040 bceB 2876123..2878063 (-) 1941 WP_086344221.1 bacitracin ABC transporter permease BceB -
  B9N48_RS15045 bceA 2878053..2878814 (-) 762 WP_029946123.1 bacitracin ABC transporter ATP-binding protein BceA -
  B9N48_RS15050 bceS 2878916..2879920 (-) 1005 WP_024573099.1 two-component sensor histidine kinase BceS -
  B9N48_RS15055 braR 2879913..2880608 (-) 696 WP_048655237.1 two-component response regulator BceR Regulator
  B9N48_RS15060 ytrF 2880705..2882015 (-) 1311 WP_038429494.1 ABC transporter permease YtrF -
  B9N48_RS15065 ytrE 2882005..2882700 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  B9N48_RS15070 ytrD 2882715..2883692 (-) 978 WP_086344222.1 ABC transporter permease YtrD -
  B9N48_RS15075 - 2883722..2884574 (-) 853 Protein_2930 ABC transporter permease subunit -
  B9N48_RS15080 ytrB 2884568..2885446 (-) 879 WP_086344223.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26894.80 Da        Isoelectric Point: 5.3731

>NTDB_id=190820 B9N48_RS15055 WP_048655237.1 2879913..2880608(-) (braR) [Bacillus subtilis strain TLO3]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=190820 B9N48_RS15055 WP_048655237.1 2879913..2880608(-) (braR) [Bacillus subtilis strain TLO3]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCAATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment