Detailed information NTG0190638

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: CAY59_RS02685
• Genome accession: NZ_CP021145
• Coordinates: 544246..547068 (-)
• Length: 940 a.a.
• NCBI ID: WP_086368945.1
• Uniprot ID: -
• Organism: Vibrio campbellii strain LA16-V1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 539246..552068

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CAY59_RS02665 (CAY59_02620)	lysC	539337..540689 (-)	1353	WP_086368943.1	lysine-sensitive aspartokinase 3	-
CAY59_RS02675 (CAY59_02630)	-	541216..542337 (+)	1122	WP_047482407.1	alanine--glyoxylate aminotransferase family protein	-
CAY59_RS02680 (CAY59_02635)	-	542394..544178 (-)	1785	WP_086368944.1	PglL family O-oligosaccharyltransferase	-
CAY59_RS02685 (CAY59_02640)	uvrA	544246..547068 (-)	2823	WP_086368945.1	excinuclease ABC subunit UvrA	Machinery gene
CAY59_RS02690 (CAY59_02645)	galU	547207..548079 (-)	873	WP_005432802.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
CAY59_RS02695 (CAY59_02650)	qstR	548244..548888 (-)	645	WP_005432827.1	LuxR C-terminal-related transcriptional regulator	Regulator
CAY59_RS02700 (CAY59_02655)	ssb	549182..549718 (+)	537	WP_005432828.1	single-stranded DNA-binding protein	Machinery gene
CAY59_RS02705 (CAY59_02660)	csrD	549966..551975 (+)	2010	WP_086368946.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103883.25 Da
• Isoelectric Point: 6.4805

>NTDB_id=190638 CAY59_RS02685 WP_086368945.1 544246..547068(-) (uvrA) [Vibrio campbellii strain LA16-V1]
MDKIEVRGARTHNLKDINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHTPLAAQTISQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPPLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGD
GDEVIFSANFACPICGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDETLSLAQGAIRGWDQKNYYYFQML
TALADHYGFDLHAPFNALPKKTQDIILKGSGRTEVEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALEFFHTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVPKERTPRDPKKTVELLGATGNNLKNVDLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAHPSPYKAIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=190638 CAY59_RS02685 WP_086368945.1 544246..547068(-) (uvrA) [Vibrio campbellii strain LA16-V1]
ATGGATAAAATAGAAGTTCGTGGTGCCCGCACCCATAACCTCAAAGACATCAACCTCACTATCCCCCGCGATAAACTGAT
TGTCATTACTGGTTTGAGTGGTTCTGGTAAATCCTCTCTCGCATTCGACACTTTGTACGCTGAAGGTCAAAGACGTTACG
TAGAGTCACTATCAGCTTACGCGCGCCAATTTTTGTCTCTTATGGAAAAGCCAGATGTTGACCACATCGAAGGTTTGTCT
CCTGCGATCTCGATTGAGCAGAAATCAACATCACACAACCCACGTTCTACCGTCGGTACCATTACCGAGGTATACGATTA
CCTGCGTCTACTTTACGCTCGCGTTGGTGAGCCTCGTTGTCCGACGCACCATACGCCTCTAGCCGCTCAAACCATCAGCC
AGATGGTCGATAAAGTCTTAGAGTTGCCAGAAGGTAGCAAAATGATGCTACTTGCGCCTATTGTGAAAGAACGTAAAGGT
GAGCATGTTAAGACTCTAGAGAACCTCGCTGCTCAAGGTTTCATCCGCGCACGCATCGATGGTGAAACTTGCGATCTTTC
TGATCCACCGCCGTTAGAACTGCACAAGAAACACACTATCGAAGTGGTTGTGGACCGCTTTAAAGTTCGCCCAGATTTGC
AGCAACGTTTGGCTGAATCCTTCGAAACCACACTAGAGCTATCTGGTGGTATTGCTGTTGTTGCTCCAATGGACGGCGAC
GGCGATGAGGTGATCTTCTCAGCTAACTTTGCTTGCCCTATTTGTGGCTACAGCATGCAAGAACTTGAGCCTCGTTTGTT
CTCATTCAACAACCCAGCGGGGGCGTGTGGCACTTGTGATGGTTTAGGTGTGCAGCAATATTTCGACCCAAGCCGAGTTA
TTCAAGATGAAACTCTGAGTTTGGCACAAGGTGCGATTCGAGGTTGGGATCAAAAGAACTACTATTATTTCCAGATGCTG
ACTGCGCTGGCGGATCATTACGGGTTCGATCTTCACGCACCATTTAACGCTCTACCAAAGAAAACCCAAGACATCATTCT
TAAAGGATCGGGGCGTACTGAAGTAGAGTTCAAGTACATTAACGATCGTGGTGACATTCGCGTTAAGCGCCATCCTTTTG
AAGGGATCCTGAATACACTTGAACGCCGTTACCGCGACACTGAATCTAACTCGGTACGTGAAGAGCTTGCGAAATACATC
TCTACCAAGTCTTGTTCAAGCTGTGGCGGTACTCGTCTGCGCCTTGAAGCTCGTAACGTCTTTATCGCCGATACGACACT
ACCGGAGATTGTTGAACTCAGCATCGCCGACGCATTGGAGTTCTTCCACACTTTGAAGCTTGAAGGCCAACGCGCCCAAA
TCGCTGAAAAAGTGATGAAGGAAATCAACGACCGCCTACAATTCCTGGTTAACGTTGGTTTGAACTACCTCAACTTATCA
CGCAGCGCGGAAACCTTATCAGGCGGTGAGGCTCAACGTATTCGTTTAGCGAGCCAAATTGGTGCGGGTCTAGTCGGTGT
TATGTACGTACTGGATGAGCCATCAATTGGTCTCCACCAGCGTGATAACGAACGTCTATTGAAAACTCTGACCCACTTAA
GAGATTTAGGTAACACGGTATTAGTGGTTGAGCACGATGAAGATGCGATTCGTTGTGCTGATCACGTGATCGATATCGGT
CCAGGCGCAGGTGTACACGGTGGTAACGTGGTCGCTGAAGGTACGATGGACGAGATCATTGCCAATCCGAACTCACTGAC
TGGTCAGTACCTCAGTGGCGCGAAAGAGATTGCGGTACCAAAAGAGCGTACACCACGCGATCCAAAGAAAACCGTTGAAC
TACTTGGCGCGACAGGTAACAACTTAAAGAATGTCGATCTTTCCGTTCCTGTTGGCTTGTTCAGCTGTATTACCGGTGTA
TCCGGCTCAGGTAAGTCGACTCTGATCAACGATACCTTCTTTAAGATTGCTCATACCCAGTTGAACGGCGCAACAACGGC
GCACCCTTCACCATACAAAGCGATCAAAGGTTTAGAGCACTTCGATAAAGTTATCGACATTGACCAAAGCCCTATCGGTC
GTACACCACGTTCAAACCCAGCCACTTACACGGGGATCTTTACTCCGATTCGTGAACTGTTTGCTGGCACGCAAGAGTCG
CGCTCTCGCGGTTACAAACCGGGGCGCTTTAGCTTTAACGTACGCGGTGGTCGCTGTGAGGCCTGTCAGGGCGATGGCGT
AATCAAGGTGGAAATGCACTTCCTCCCTGACGTCTACGTTCCTTGTGATGTGTGTAAAGGTAAACGCTACAACCGCGAAA
CACTTGAAGTACGTTATAAAGGCAAGACCATTGATGAAGTACTGGAAATGACGGTAGAAGATGCACGTACTTTCTTCGAT
CCAGTACCAGCGATTGCTCGTAAGCTGCAAACTCTGATGGATGTAGGTTTGTCTTACATTCGCTTAGGTCAAGCGGCAAC
TACGCTGTCAGGTGGTGAAGCTCAGCGTGTAAAACTGGCTCGAGAGCTATCTAAGCGTGATACAGGTAAAACCTTATACA
TTTTGGATGAGCCGACAACAGGTCTGCACTTCCACGATATCCAGCAGCTACTAACTGTACTGCACCGTCTGCGCGACCAC
GGAAATACCGTTGTTGTCATCGAACATAACCTCGATGTCATTAAGACGGCAGACTGGATTATCGACTTAGGCCCTGAAGG
TGGACAAGGTGGTGGTGAGATCATTGCACAAGGAACCCCTGAAGATGTGTCTCAGATCGAAGGTTCACACACAGCTCGCT
TCCTTAAGCCTATGTTGAAGTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-859)

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.537	100	0.577
uvrA	Streptococcus pneumoniae TIGR4	57.537	100	0.577
uvrA	Streptococcus pneumoniae D39	57.537	100	0.577