Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   CAH07_RS21290 Genome accession   NZ_CP021123
Coordinates   4081327..4082154 (-) Length   275 a.a.
NCBI ID   WP_003243571.1    Uniprot ID   P37541
Organism   Bacillus subtilis strain SEM-9     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 4076327..4087154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAH07_RS21265 (CAH07_21070) abrB 4078673..4078963 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  CAH07_RS21270 (CAH07_21075) rsmI 4079012..4079890 (-) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  CAH07_RS21275 (CAH07_21080) yazA 4079865..4080164 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  CAH07_RS21280 (CAH07_21085) trmNF 4080151..4080894 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  CAH07_RS21285 (CAH07_21090) yabA 4080953..4081312 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  CAH07_RS21290 (CAH07_21095) yaaT 4081327..4082154 (-) 828 WP_003243571.1 competence/sporulation regulator complex protein RicT Regulator
  CAH07_RS21295 (CAH07_21100) holB 4082157..4083146 (-) 990 WP_003244417.1 DNA polymerase III subunit delta' -
  CAH07_RS21300 (CAH07_21105) yaaR 4083158..4083598 (-) 441 WP_009966249.1 YaaR family protein -
  CAH07_RS21305 (CAH07_21110) darA 4083611..4083940 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  CAH07_RS21310 (CAH07_21115) tmk 4084014..4084652 (-) 639 WP_003243137.1 dTMP kinase -
  CAH07_RS21315 (CAH07_21120) efpO 4084649..4086091 (-) 1443 WP_029726395.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31219.06 Da        Isoelectric Point: 4.7658

>NTDB_id=190618 CAH07_RS21290 WP_003243571.1 4081327..4082154(-) (yaaT) [Bacillus subtilis strain SEM-9]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=190618 CAH07_RS21290 WP_003243571.1 4081327..4082154(-) (yaaT) [Bacillus subtilis strain SEM-9]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCAGACGATCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P37541

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment