Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CAH07_RS05835 Genome accession   NZ_CP021123
Coordinates   1127247..1127942 (+) Length   231 a.a.
NCBI ID   WP_003229133.1    Uniprot ID   -
Organism   Bacillus subtilis strain SEM-9     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1122247..1132942
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAH07_RS05810 (CAH07_05745) ytrB 1122275..1123153 (+) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -
  CAH07_RS05815 (CAH07_05750) ytrC 1123147..1124133 (+) 987 WP_029726914.1 ABC transporter permease YtrC -
  CAH07_RS05820 (CAH07_05755) ytrD 1124163..1125140 (+) 978 WP_029726913.1 ABC transporter permease YtrD -
  CAH07_RS05825 (CAH07_05760) ytrE 1125155..1125850 (+) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  CAH07_RS05830 (CAH07_05765) ytrF 1125840..1127150 (+) 1311 WP_029318285.1 ABC transporter permease YtrF -
  CAH07_RS05835 (CAH07_05770) braR 1127247..1127942 (+) 696 WP_003229133.1 two-component response regulator BceR Regulator
  CAH07_RS05840 (CAH07_05775) bceS 1127935..1128939 (+) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  CAH07_RS05845 (CAH07_05780) bceA 1129041..1129802 (+) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  CAH07_RS05850 (CAH07_05785) bceB 1129792..1131732 (+) 1941 WP_029318283.1 bacitracin ABC transporter permease BceB -
  CAH07_RS05855 (CAH07_05790) yttA 1131769..1132515 (-) 747 WP_014480618.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26865.76 Da        Isoelectric Point: 5.6471

>NTDB_id=190501 CAH07_RS05835 WP_003229133.1 1127247..1127942(+) (braR) [Bacillus subtilis strain SEM-9]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNNKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=190501 CAH07_RS05835 WP_003229133.1 1127247..1127942(+) (braR) [Bacillus subtilis strain SEM-9]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCTATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATAACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTTTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment