Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CAH07_RS03460 Genome accession   NZ_CP021123
Coordinates   675592..676305 (+) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain SEM-9     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 670592..681305
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAH07_RS03425 (CAH07_03390) rppI 670838..671314 (+) 477 WP_080265396.1 8-oxo-dGTP diphosphatase -
  CAH07_RS03430 (CAH07_03395) rapZ 671339..672226 (+) 888 WP_003243903.1 RNase adapter RapZ -
  CAH07_RS03435 (CAH07_03400) mgfK 672228..673181 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  CAH07_RS03440 (CAH07_03405) whiA 673204..674154 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  CAH07_RS03445 (CAH07_03410) crh 674178..674435 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  CAH07_RS03450 (CAH07_03415) yvcN 674436..675200 (+) 765 WP_015251150.1 arylamine N-acetyltransferase -
  CAH07_RS03455 (CAH07_03420) - 675236..675445 (-) 210 WP_029318346.1 hypothetical protein -
  CAH07_RS03460 (CAH07_03425) braR 675592..676305 (+) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  CAH07_RS03465 (CAH07_03430) psdS 676299..677369 (+) 1071 WP_029318347.1 two-component sensor histidine kinase PsdS -
  CAH07_RS03470 (CAH07_03435) psdA 677452..678231 (+) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  CAH07_RS03475 (CAH07_03440) psdB 678206..680146 (+) 1941 WP_101172216.1 lantibiotic ABC transporter permease PsdB -
  CAH07_RS03480 (CAH07_03445) ghrB 680184..681161 (-) 978 WP_072557265.1 D-glycerate dehydrogenase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=190491 CAH07_RS03460 WP_003244535.1 675592..676305(+) (braR) [Bacillus subtilis strain SEM-9]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=190491 CAH07_RS03460 WP_003244535.1 675592..676305(+) (braR) [Bacillus subtilis strain SEM-9]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment