Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CAH07_RS00760 Genome accession   NZ_CP021123
Coordinates   144563..145252 (+) Length   229 a.a.
NCBI ID   WP_029318588.1    Uniprot ID   -
Organism   Bacillus subtilis strain SEM-9     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 139563..150252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAH07_RS00740 (CAH07_00725) iolG 140717..141751 (+) 1035 WP_003227066.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -
  CAH07_RS00745 (CAH07_00730) iolH 141771..142640 (+) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  CAH07_RS00750 (CAH07_00735) iolI 142726..143562 (+) 837 WP_003227070.1 2-keto-myo-inositol isomerase -
  CAH07_RS00755 (CAH07_00740) iolJ 143583..144455 (+) 873 WP_015250854.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  CAH07_RS00760 (CAH07_00745) braR 144563..145252 (+) 690 WP_029318588.1 two-component system response regulator YxdJ Regulator
  CAH07_RS00765 (CAH07_00750) yxdK 145249..146226 (+) 978 WP_003227076.1 two-component system sensor histidine kinase YxdK -
  CAH07_RS00770 (CAH07_00755) yxdL 146370..147143 (+) 774 WP_032676945.1 ABC transporter ATP-binding protein YxdL -
  CAH07_RS00775 (CAH07_00760) yxdM 147118..148986 (+) 1869 WP_129010265.1 ABC transporter permease YxdM -
  CAH07_RS00780 (CAH07_00765) yxeA 149000..149347 (+) 348 WP_003227084.1 YxeA family protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26584.38 Da        Isoelectric Point: 4.9502

>NTDB_id=190476 CAH07_RS00760 WP_029318588.1 144563..145252(+) (braR) [Bacillus subtilis strain SEM-9]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSLLSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=190476 CAH07_RS00760 WP_029318588.1 144563..145252(+) (braR) [Bacillus subtilis strain SEM-9]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGTGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCTTGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(153-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406