Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   B9T42_RS03350 Genome accession   NZ_CP020957
Coordinates   670013..670687 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain C3948     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 665013..675687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9T42_RS03320 (B9T42_03320) - 665228..666295 (+) 1068 WP_000980137.1 membrane protein -
  B9T42_RS03325 (B9T42_03325) - 666446..667489 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  B9T42_RS03335 (B9T42_03335) - 667818..668246 (+) 429 WP_000198504.1 hypothetical protein -
  B9T42_RS03340 (B9T42_03340) - 668455..668961 (-) 507 WP_000940134.1 GNAT family N-acetyltransferase -
  B9T42_RS03345 (B9T42_03345) graX 669074..669997 (+) 924 WP_000802946.1 auxiliary protein GraX/ApsX -
  B9T42_RS03350 (B9T42_03350) braR 670013..670687 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  B9T42_RS03355 (B9T42_03355) graS 670680..671720 (+) 1041 WP_001061251.1 histidine kinase GraS/ApsS -
  B9T42_RS03360 (B9T42_03360) vraF 671864..672625 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  B9T42_RS03365 (B9T42_03365) vraG 672615..674504 (+) 1890 WP_129940408.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=190068 B9T42_RS03350 WP_001166505.1 670013..670687(+) (braR) [Staphylococcus aureus strain C3948]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=190068 B9T42_RS03350 WP_001166505.1 670013..670687(+) (braR) [Staphylococcus aureus strain C3948]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402