Detailed information NTG0189880

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: B9L64_RS19995
• Genome accession: NZ_CP020915
• Coordinates: 3873135..3874271 (+)
• Length: 378 a.a.
• NCBI ID: WP_015252291.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain 50-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3868135..3879271

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B9L64_RS19975	uxaA	3868586..3870079 (+)	1494	WP_019712454.1	altronate dehydratase family protein	-
B9L64_RS19980	yjnA	3870118..3870882 (-)	765	WP_014476525.1	sulfite exporter TauE/SafE family protein	-
B9L64_RS19985	bstD	3871106..3871570 (-)	465	WP_014479541.1	DinB family protein	-
B9L64_RS19990	yjoB	3871719..3872990 (+)	1272	WP_003245490.1	ATPase YjoB	-
B9L64_RS19995	rapC	3873135..3874271 (+)	1137	WP_015252291.1	response regulator aspartate phosphatase RapA	Regulator
B9L64_RS20000	phrA	3874261..3874395 (+)	135	WP_003245487.1	phosphatase RapA inhibitor PhrA	-
B9L64_RS20005	yjpA	3874426..3874683 (-)	258	WP_003232731.1	YciI family protein	-
B9L64_RS20010	xlyB	3874803..3875756 (+)	954	WP_032721375.1	N-acetylmuramoyl-L-alanine amidase	-
B9L64_RS20015	yjqA	3875796..3876173 (-)	378	WP_014476529.1	PH domain-containing protein	-
B9L64_RS20020	pghB	3876278..3876880 (+)	603	WP_015252289.1	poly-gamma-glutamate hydrolase family protein	-
B9L64_RS20025	xpdC	3876957..3877793 (+)	837	WP_003245071.1	manganese catalase family protein	-
B9L64_RS20030	xkdA	3877829..3878425 (-)	597	WP_019712456.1	ImmA/IrrE family metallo-endopeptidase	-
B9L64_RS20035	xre	3878588..3878929 (-)	342	WP_110109623.1	HTH-type transcriptional regulator Xre	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 45046.23 Da
• Isoelectric Point: 4.7218

>NTDB_id=189880 B9L64_RS19995 WP_015252291.1 3873135..3874271(+) (rapC) [Bacillus subtilis strain 50-1]
MRMKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPFGEDTSQLE
FSELLEDIEGNQYKLTGLLEYYFNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQK
AAEYFEKSVSICKSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVELFQFLHALYGKNIDTESVS
HTFQFLEEHMLYPYIEELAHDAAQFYIENGQPEKALSFYEKMVHAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=189880 B9L64_RS19995 WP_015252291.1 3873135..3874271(+) (rapC) [Bacillus subtilis strain 50-1]
TTGAGGATGAAGCAGACGATTCCGTCCTCATATGTCGGGCTTAAAATTAATGAATGGTATACTCATATCCGGCAGTTCCA
CGTCGCTGAAGCCGAACGGGTCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGATTTGCTGCTGT
ATTATTCTTTAATGGAGTTCAGGCATCGTGTCATGCTGGATTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTGGAG
TTTTCAGAATTATTAGAAGACATCGAAGGGAATCAGTACAAGCTGACAGGGCTTCTCGAATATTACTTTAATTTTTTTCG
AGGAATGTATGAATTTAAGCAGAAGATGTTTGTCAGTGCCATGATGTACTATAAACGGGCAGAAAAGAATCTTGCTCTCG
TCTCGGATGATATTGAGAAAGCCGAGTTTGCTTTTAAAATGGCTGAGATTTTTTACAATTTAAAACAAACCTATGTTTCG
ATGAGCTACGCCGTTCAGGCATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGA
AAGAAGGCAATCCCCGCCTGATCAGTTCCGCCCTGTATAATCTCGGAAACTGCTATGAGAAAATGGGTGAACTGCAAAAG
GCAGCCGAATACTTTGAGAAATCTGTTTCTATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT
AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGTATCGTGAAGGATTGGAAATCGCCCGTCAAT
ACAGTGATGAATTATTTGTGGAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATTGACACAGAATCGGTCTCA
CACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTTATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATAT
AGAAAACGGACAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAAACAAATCCAGAGAGGAGATT
GTTTATATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-67)

• Tetratricopeptide repeat (TPR_12) (221-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.947	99.471	0.447
rapF	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.418