Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   B9L64_RS12455 Genome accession   NZ_CP020915
Coordinates   2437057..2437746 (-) Length   229 a.a.
NCBI ID   WP_029318588.1    Uniprot ID   -
Organism   Bacillus subtilis strain 50-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2432057..2442746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9L64_RS12435 yxeA 2432962..2433309 (-) 348 WP_015715011.1 YxeA family protein -
  B9L64_RS12440 yxdM 2433323..2435191 (-) 1869 WP_015715012.1 ABC transporter permease YxdM -
  B9L64_RS12445 yxdL 2435166..2435939 (-) 774 WP_032676945.1 ABC transporter ATP-binding protein YxdL -
  B9L64_RS12450 yxdK 2436083..2437060 (-) 978 WP_003227076.1 two-component system sensor histidine kinase YxdK -
  B9L64_RS12455 braR 2437057..2437746 (-) 690 WP_029318588.1 two-component system response regulator YxdJ Regulator
  B9L64_RS12460 iolJ 2437854..2438726 (-) 873 WP_015250854.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  B9L64_RS12465 iolI 2438747..2439583 (-) 837 WP_003227070.1 2-keto-myo-inositol isomerase -
  B9L64_RS12470 iolH 2439669..2440538 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  B9L64_RS12475 iolG 2440558..2441592 (-) 1035 WP_003227066.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26584.38 Da        Isoelectric Point: 4.9502

>NTDB_id=189818 B9L64_RS12455 WP_029318588.1 2437057..2437746(-) (braR) [Bacillus subtilis strain 50-1]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSLLSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=189818 B9L64_RS12455 WP_029318588.1 2437057..2437746(-) (braR) [Bacillus subtilis strain 50-1]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGTGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCTTGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(153-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406