Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   B9L64_RS09855 Genome accession   NZ_CP020915
Coordinates   1930333..1931046 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain 50-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1925333..1936046
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9L64_RS09835 ghrB 1925477..1926454 (+) 978 WP_010886621.1 bifunctional glyoxylate/hydroxypyruvate reductase B -
  B9L64_RS09840 psdB 1926492..1928432 (-) 1941 WP_003243432.1 lantibiotic ABC transporter permease PsdB -
  B9L64_RS09845 psdA 1928407..1929186 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  B9L64_RS09850 psdS 1929269..1930339 (-) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  B9L64_RS09855 braR 1930333..1931046 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  B9L64_RS09860 yvzJ 1931193..1931402 (+) 210 WP_003243327.1 lipoprotein -
  B9L64_RS09865 yvcN 1931438..1932202 (-) 765 WP_009968228.1 arylamine N-acetyltransferase -
  B9L64_RS09870 crh 1932203..1932460 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  B9L64_RS09875 whiA 1932484..1933434 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  B9L64_RS09880 mgfK 1933457..1934410 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  B9L64_RS09885 rapZ 1934412..1935299 (-) 888 WP_003243903.1 RNase adapter RapZ -
  B9L64_RS09890 rppI 1935324..1935800 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=189803 B9L64_RS09855 WP_003244535.1 1930333..1931046(-) (braR) [Bacillus subtilis strain 50-1]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=189803 B9L64_RS09855 WP_003244535.1 1930333..1931046(-) (braR) [Bacillus subtilis strain 50-1]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43