Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BCV53_RS00475 Genome accession   NZ_CP016622
Coordinates   84475..85422 (-) Length   315 a.a.
NCBI ID   WP_013876287.1    Uniprot ID   A0AAN1D5D4
Organism   Parageobacillus thermoglucosidasius strain Wild Type     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 79475..90422
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCV53_RS00445 (BCV53_00445) bioD 80177..80896 (-) 720 WP_042385198.1 dethiobiotin synthase -
  BCV53_RS00450 (BCV53_00450) - 80896..81459 (-) 564 WP_042385200.1 biotin transporter BioY -
  BCV53_RS00460 (BCV53_00460) - 81701..82657 (-) 957 WP_013400054.1 siderophore ABC transporter substrate-binding protein -
  BCV53_RS00465 (BCV53_00465) - 82780..83538 (-) 759 WP_013400053.1 ABC transporter ATP-binding protein -
  BCV53_RS00470 (BCV53_00470) - 83532..84482 (-) 951 WP_013876288.1 iron chelate uptake ABC transporter family permease subunit -
  BCV53_RS00475 (BCV53_00475) ceuB 84475..85422 (-) 948 WP_013876287.1 ABC transporter permease Machinery gene
  BCV53_RS00480 (BCV53_00480) - 85877..86443 (+) 567 WP_013400050.1 FAD-dependent oxidoreductase -
  BCV53_RS00485 (BCV53_00485) - 86561..87307 (-) 747 WP_003248205.1 ABC transporter ATP-binding protein -
  BCV53_RS00490 (BCV53_00490) - 87308..88084 (-) 777 WP_013400049.1 ABC transporter ATP-binding protein -
  BCV53_RS00495 (BCV53_00495) - 88081..89145 (-) 1065 WP_013400048.1 branched-chain amino acid ABC transporter permease -
  BCV53_RS00500 (BCV53_00500) - 89158..90039 (-) 882 WP_013400047.1 branched-chain amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34581.87 Da        Isoelectric Point: 9.6176

>NTDB_id=189686 BCV53_RS00475 WP_013876287.1 84475..85422(-) (ceuB) [Parageobacillus thermoglucosidasius strain Wild Type]
MKKLFILFVILAVASLFIGVQHISLADLLMLKADDVEVLIISRIPRLISIIIAGASMSICGLIMQQLSQNKFVSPTTAGT
MDCARLGILVSLILFASAGPLLKVTIAFLFAFAGTMIFMRILEKVKYKDAIFIPLVGLMFGNIISSMTTFFAYKYNLIQS
ISSWLHGDFSMIIKGRYELLYLSVPLMIVAYMYANRFTIAGMGEEIATNLGLHYRSIVNVGLIIVAATSSVVVLTVGTLP
FLGLIIPNLVTLYYGDHLEKVLPLTALSGAIFVLACDIFGRVVIYPYEIPIGLTVGVIGSGVFLYLLVRRRKQYV

Nucleotide


Download         Length: 948 bp        

>NTDB_id=189686 BCV53_RS00475 WP_013876287.1 84475..85422(-) (ceuB) [Parageobacillus thermoglucosidasius strain Wild Type]
ATGAAAAAGCTGTTTATATTATTCGTCATATTAGCAGTTGCATCTTTATTTATCGGTGTCCAGCATATTTCGCTTGCCGA
TTTGCTGATGTTGAAAGCGGATGACGTAGAAGTATTAATAATCAGCCGGATTCCGCGGTTGATCAGCATTATTATTGCGG
GTGCCAGCATGAGTATTTGCGGGCTAATTATGCAGCAGTTAAGCCAAAATAAGTTTGTCTCGCCAACGACGGCGGGGACG
ATGGATTGCGCAAGGTTAGGAATTTTAGTGTCATTGATTTTGTTCGCTTCCGCAGGTCCGCTGCTGAAAGTTACGATCGC
ATTTTTATTCGCTTTTGCCGGTACGATGATTTTTATGAGAATACTTGAAAAAGTGAAATATAAAGACGCCATTTTTATTC
CGCTTGTCGGTTTAATGTTTGGCAATATCATCAGTTCCATGACAACATTTTTCGCGTATAAGTACAATTTAATCCAATCC
ATTTCGTCATGGCTGCATGGCGATTTTTCCATGATTATAAAAGGGCGGTATGAACTGCTTTACTTAAGTGTTCCGCTTAT
GATTGTCGCTTATATGTATGCGAACCGTTTTACGATAGCAGGAATGGGAGAAGAAATCGCGACAAATTTAGGCCTTCATT
ATCGGTCCATCGTCAATGTTGGGTTAATCATCGTGGCTGCTACTTCTTCTGTTGTGGTGCTGACGGTCGGGACACTGCCG
TTTTTAGGATTGATTATTCCAAACCTTGTCACATTATATTATGGAGATCATTTAGAGAAAGTCCTGCCTCTGACGGCATT
GTCAGGAGCAATTTTCGTGTTGGCTTGCGATATTTTCGGGCGCGTCGTTATTTATCCGTATGAAATCCCGATCGGTTTGA
CGGTAGGAGTCATTGGCAGCGGCGTATTTTTGTATTTGCTAGTAAGGAGAAGAAAGCAATATGTCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(7-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

55.305

98.73

0.546

Multiple sequence alignment