Detailed information NTG0189571

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCD20_RS24040
• Genome accession: NZ_CP020835
• Coordinates: 4598184..4599209 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CFSAN051542
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4593184..4604209

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCD20_RS24020 (BCD20_24020)	metJ	4594245..4594562 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
BCD20_RS24025 (BCD20_24025)	yiiX	4594746..4595354 (+)	609	WP_032237140.1	YiiX family permuted papain-like enzyme	-
BCD20_RS24030 (BCD20_24030)	rpmE	4595415..4595627 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
BCD20_RS24035 (BCD20_24035)	priA	4595830..4598028 (+)	2199	WP_001400571.1	primosomal protein N'	Machinery gene
BCD20_RS24040 (BCD20_24040)	cytR	4598184..4599209 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
BCD20_RS24045 (BCD20_24045)	ftsN	4599301..4600260 (+)	960	WP_000068828.1	cell division protein FtsN	-
BCD20_RS24050 (BCD20_24050)	hslV	4600353..4600883 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
BCD20_RS24055 (BCD20_24055)	hslU	4600893..4602224 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
BCD20_RS24060 (BCD20_24060)	menA	4602291..4603217 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCD20_RS24065 (BCD20_24065)	rraA	4603310..4603795 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
BCD20_RS24070 (BCD20_24070)	zapB	4603880..4604125 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=189571 BCD20_RS24040 WP_000644904.1 4598184..4599209(+) (cytR) [Escherichia coli strain CFSAN051542]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=189571 BCD20_RS24040 WP_000644904.1 4598184..4599209(+) (cytR) [Escherichia coli strain CFSAN051542]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATTGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628