Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   BA204_RS21595 Genome accession   NZ_CP016595
Coordinates   4114008..4115747 (-) Length   579 a.a.
NCBI ID   WP_000947763.1    Uniprot ID   A0A9X7G6N7
Organism   Bacillus cereus strain K8     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4109008..4120747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BA204_RS21560 (BA204_20300) - 4109241..4109474 (+) 234 WP_001190214.1 DUF2627 domain-containing protein -
  BA204_RS21565 (BA204_20305) - 4109524..4110252 (-) 729 WP_000172572.1 glycerophosphodiester phosphodiesterase -
  BA204_RS21570 (BA204_20310) - 4110303..4110449 (+) 147 WP_001247674.1 YycC family protein -
  BA204_RS21575 (BA204_20315) - 4110691..4111254 (-) 564 WP_000428232.1 PRK06770 family protein -
  BA204_RS21580 (BA204_20320) spo0A 4111506..4112300 (-) 795 WP_021727703.1 sporulation transcription factor Spo0A Regulator
  BA204_RS21590 (BA204_20325) spoIVB 4112591..4113889 (-) 1299 WP_088911190.1 SpoIVB peptidase -
  BA204_RS21595 (BA204_20330) recN 4114008..4115747 (-) 1740 WP_000947763.1 DNA repair protein RecN Machinery gene
  BA204_RS21600 (BA204_20335) argR 4116012..4116461 (-) 450 WP_001032580.1 arginine repressor ArgR -
  BA204_RS21605 (BA204_20340) - 4116604..4117443 (-) 840 WP_000111874.1 TlyA family RNA methyltransferase -
  BA204_RS21610 (BA204_20345) dxs 4117447..4119339 (-) 1893 WP_000366454.1 1-deoxy-D-xylulose-5-phosphate synthase -
  BA204_RS21615 (BA204_20350) ispA 4119641..4120531 (-) 891 WP_000150374.1 (2E,6E)-farnesyl diphosphate synthase -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 65838.91 Da        Isoelectric Point: 4.8260

>NTDB_id=189499 BA204_RS21595 WP_000947763.1 4114008..4115747(-) (recN) [Bacillus cereus strain K8]
MLSELSIRNFAIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGGRGSAEFVRYGTEKAEIEGLFYVEDEKHPCIEK
AEELDIEIEDGMIILKRDIAANGKSVCRVNGKLVTLSILKEIGKTLVDIHGQHETQDLMNEERHLFMLDHFDGDRIVKQL
DIYQNVYADYEKLKKQLKSLSENEQQMAHRLDLIQFQHEEIRKADLKMDEENELTEERLQISNFEKIYKALGDAYRSLSA
DGQGLDNVRSAMGQMESITHLDDVYQENHDSIANSYYLLEEVAYQLREKLDMMEYDPNRLDEIETRLNEIRMLKRKYGNN
VEEILAYADKIEQEIFTIENKDVHIETTKKQLKELESVIMKEATLLSNMRHELAEHLTNAIHQELKELYMEKTKFEVRIM
KREGNAEEPLVEGAPVRLTADGYDHVEFYISTNPGEPLKPLSKVASGGELSRIILALKSIFSKHQGVASVIFDEVDTGVS
GRVAQAIAEKIYRVSVNSQVLCITHLPQVASMADSHLFIRKQVANDRTITSVTVLTMEDKVTEIARMISGVEITDLTTEH
AKELLTQAHHFKQTAEAIQ

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=189499 BA204_RS21595 WP_000947763.1 4114008..4115747(-) (recN) [Bacillus cereus strain K8]
TTGTTATCGGAATTATCGATTAGAAACTTTGCTATTATTGAAGCATTAAATATTTCTTTTCAAAAAGGTTTAACGGTTTT
AAGCGGTGAAACAGGGGCCGGAAAATCGATTATTATTGATGCAATTAGTTTACTTGTAGGTGGCCGTGGGTCAGCAGAAT
TTGTTCGATATGGAACAGAAAAGGCTGAGATTGAAGGGCTATTTTATGTTGAAGATGAGAAGCATCCATGTATTGAAAAG
GCAGAAGAGTTAGATATAGAAATAGAAGATGGTATGATTATTTTAAAGCGTGATATTGCTGCGAACGGGAAGAGTGTATG
TCGTGTAAATGGGAAGCTTGTTACACTTAGCATATTAAAAGAAATTGGGAAAACACTTGTTGATATTCATGGACAGCACG
AAACGCAAGATTTAATGAATGAAGAACGACATCTGTTTATGCTTGATCACTTTGATGGGGATCGAATCGTTAAACAATTA
GACATATATCAAAACGTATACGCTGACTATGAAAAATTAAAAAAACAATTGAAATCGTTAAGTGAAAATGAGCAACAAAT
GGCACATCGCTTAGATTTAATTCAATTTCAGCACGAGGAAATTCGCAAGGCGGATTTAAAGATGGATGAAGAAAATGAAT
TAACTGAGGAACGATTGCAAATTTCTAATTTTGAAAAGATTTATAAAGCGTTAGGTGATGCATATCGTTCTTTAAGTGCC
GACGGACAAGGATTAGATAATGTAAGAAGTGCAATGGGGCAAATGGAAAGTATTACACATTTAGATGATGTGTATCAAGA
GAATCATGATTCAATTGCAAATAGCTATTACTTATTAGAAGAGGTTGCCTATCAACTGAGGGAAAAGCTCGATATGATGG
AATATGATCCAAATCGTTTAGATGAAATCGAAACACGTTTGAATGAAATTCGTATGCTAAAGAGAAAATATGGAAATAAT
GTAGAAGAGATTTTAGCGTATGCTGATAAAATTGAACAGGAAATTTTTACGATTGAAAATAAAGACGTTCATATTGAAAC
GACGAAGAAACAGTTGAAGGAATTAGAAAGTGTTATTATGAAAGAAGCAACGTTGTTAAGTAATATGCGTCATGAGCTTG
CAGAACACCTTACAAATGCAATTCATCAGGAATTAAAAGAATTATATATGGAAAAAACGAAATTTGAAGTGAGAATTATG
AAGAGAGAAGGAAATGCAGAAGAGCCCCTTGTGGAAGGTGCGCCGGTAAGACTTACGGCGGATGGTTACGATCATGTGGA
ATTTTATATTTCAACGAACCCAGGAGAGCCGCTAAAACCACTTTCAAAGGTTGCTTCTGGCGGAGAGTTATCTCGTATCA
TTTTAGCTTTAAAAAGCATTTTTTCTAAGCATCAAGGGGTTGCATCTGTTATTTTTGATGAAGTGGATACGGGTGTAAGT
GGCCGGGTCGCACAGGCTATTGCGGAAAAAATTTATCGAGTATCAGTAAACTCGCAAGTACTTTGTATTACGCACTTACC
TCAAGTAGCTTCAATGGCGGATTCACATTTATTTATTCGAAAACAAGTAGCGAATGATCGGACAATTACATCAGTTACTG
TTTTAACTATGGAGGATAAAGTAACAGAAATAGCTCGAATGATTTCTGGTGTGGAAATCACAGATTTAACGACAGAGCAT
GCGAAAGAATTACTTACGCAAGCGCATCATTTTAAACAGACAGCAGAGGCTATCCAGTAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

59.758

100

0.598

Multiple sequence alignment