Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   B7474_RS09405 Genome accession   NZ_CP020714
Coordinates   1818431..1819105 (+) Length   224 a.a.
NCBI ID   WP_101766647.1    Uniprot ID   -
Organism   Staphylococcus aureus strain K18     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1813431..1824105
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7474_RS09375 (B7474_09385) - 1813646..1814713 (+) 1068 WP_000980137.1 membrane protein -
  B7474_RS09380 (B7474_09390) - 1814864..1815907 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  B7474_RS09390 (B7474_09400) - 1816236..1816664 (+) 429 WP_000198504.1 hypothetical protein -
  B7474_RS09395 (B7474_09405) - 1816873..1817379 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  B7474_RS09400 (B7474_09410) graX 1817492..1818415 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  B7474_RS09405 (B7474_09415) braR 1818431..1819105 (+) 675 WP_101766647.1 response regulator transcription factor GraR/ApsR Regulator
  B7474_RS09410 (B7474_09420) graS 1819098..1820138 (+) 1041 WP_001061247.1 histidine kinase GraS/ApsS -
  B7474_RS09415 (B7474_09425) vraF 1820282..1821043 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  B7474_RS09420 (B7474_09430) vraG 1821033..1822922 (+) 1890 WP_000143612.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26035.89 Da        Isoelectric Point: 4.3915

>NTDB_id=189335 B7474_RS09405 WP_101766647.1 1818431..1819105(+) (braR) [Staphylococcus aureus strain K18]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFVSFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=189335 B7474_RS09405 WP_101766647.1 1818431..1819105(+) (braR) [Staphylococcus aureus strain K18]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGTAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397