Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   B7473_RS11105 Genome accession   NZ_CP020713
Coordinates   2156398..2156868 (-) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain K17     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2151398..2161868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7473_RS11085 (B7473_11095) - 2153380..2154282 (+) 903 WP_000670755.1 fumarylacetoacetate hydrolase family protein -
  B7473_RS11095 (B7473_11105) - 2154581..2155882 (+) 1302 WP_001242319.1 pyrimidine-nucleoside phosphorylase -
  B7473_RS11100 (B7473_11110) - 2155896..2156246 (+) 351 WP_001024035.1 membrane protein -
  B7473_RS11105 (B7473_11115) luxS 2156398..2156868 (-) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  B7473_RS11110 (B7473_11120) - 2157179..2158363 (+) 1185 WP_001291497.1 M20 family metallopeptidase -
  B7473_RS11115 (B7473_11125) ldmS 2158363..2159556 (+) 1194 WP_000183718.1 L-aspartate--L-methionine ligase LdmS -
  B7473_RS11120 (B7473_11130) - 2159955..2160626 (+) 672 WP_000120545.1 DUF2750 domain-containing protein -
  B7473_RS11125 (B7473_11135) coaW 2160756..2161559 (-) 804 WP_000862727.1 type II pantothenate kinase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=189252 B7473_RS11105 WP_000164421.1 2156398..2156868(-) (luxS) [Staphylococcus aureus strain K17]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=189252 B7473_RS11105 WP_000164421.1 2156398..2156868(-) (luxS) [Staphylococcus aureus strain K17]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGGAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404